KEGG   Citrus sinensis (Valencia orange): 102616626
Entry
102616626         CDS       T02983                                 
Name
(RefSeq) protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03250  Viral life cycle - HIV-1
cit03272  Virion - Hepatitis viruses
cit04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102616626
   03272 Virion - Hepatitis viruses
    102616626
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102616626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102616626
   03400 DNA repair and recombination proteins [BR:cit03400]
    102616626
Membrane trafficking [BR:cit04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    102616626
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    102616626
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_5 AAA_16 RuvB_N AAA_14 AAA_22 TIP49 DUF815 NPHP3_N AAA_2 AAA_17 AAA_33 RNA_helicase IstB_IS21 AAA_25 AAA_24 Parvo_NS1 Mg_chelatase AAA_7 nSTAND3 AAA_28 AAA_18 ABC_tran PhoH ATPase_2 USP8_dimer Torsin bpMoxR DUF5113
Other DBs
NCBI-GeneID: 102616626
NCBI-ProteinID: XP_006487969
LinkDB
Position
8:join(24978581..24979061,24979601..24979706,24980216..24980414,24981323..24981391,24981477..24981551,24981677..24981775,24981996..24982151,24982402..24982527)
AA seq 436 aa
MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFT
EYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTKPKDGGDGGGGDGEDPEQAKLRAGLN
SAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRQPWRAFLLYGPPGTGKS
YLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQ
RGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLP
DLKARQHMFKVHLGDTPHSLTESDFESLARKTEGFSGSDISVCVKDVLFEPVRKTQDAMF
FFKTSNGMWMPCGPKQSGAVQISMQELAAKGLAEQILPPPISKTDFDKVLARQRPTVSKS
DLEVQERFTKEFGEEG
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgtacagcaacttcaaggaacaggcaatcgagtacgtgaaacaagccgtgcaagaagac
aatgctggaaattacgcaaaagccttccctctttacatgaacgccttggagtatttcaaa
acccacttgaagtacgagaagaatcccaagattaaggaggcgatcactcagaaattcacc
gagtatttgcgccgggccgaggagatccgtgccgttctggatgacggcgggcccggcccc
gctcacaacggggacgctgcggtggcgacccggcctaagacgaagccgaaggatggtggt
gatggtggcggcggtgatggggaggatccggagcaggcgaagctgagggctggattgaat
tcggcgattattagggagaagcctaatgttaagtggaatgacgtggcgggtttagaaagc
gctaagcaagctttgcaggaggctgtgattttgccggttaagtttccccagtttttcacc
ggtaagagacaaccgtggagagcatttctattgtatggaccacctggaactggaaagtca
tacctggccaaggctgttgcaactgaagccgactctacatttttcagtatttcttcatca
gacctggtttcaaagtggatgggtgaaagtgaaaagcttgtctcaagccttttccagatg
gctcgtgaaagtgctccttccattatttttattgatgaaatagattccttatgtggtcag
cgtggagaaggcaatgagagcgaagcttctcggcgcatcaaaactgaacttcttgtacag
atgcagggtgttggacacaacgatcagaaagttcttgttcttgctgcaacaaatactccc
tatgctctagatcaggccatccggcgacgttttgacaagcgtatatacatccctcttcca
gatttgaaggcaagacagcacatgttcaaggtgcatttaggagatacaccccacagtttg
actgaaagtgattttgaaagtttagctcgcaagaccgaggggttttctggttctgatatt
tccgtttgtgtaaaggatgtcttgttcgaacctgtacggaaaactcaggatgccatgttt
ttctttaagacctctaatggtatgtggatgccatgtggaccgaagcaatcaggtgctgtt
cagatttcgatgcaggagcttgcagcaaaagggcttgcagaacagatccttccaccccct
atttcgaaaacagattttgataaagttcttgcaagacagaggccaacagtgagcaaaagt
gatcttgaagttcaagagagattcacaaaggagtttggagaggaaggttaa

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