Citrus sinensis (Valencia orange): 102616755
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Entry
102616755 CDS
T02983
Name
(RefSeq) protein PELOTA 1-like
KO
K06965
protein pelota
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102616755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102616755
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102616755
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
PIF1
Motif
Other DBs
NCBI-GeneID:
102616755
NCBI-ProteinID:
XP_006492759
LinkDB
All DBs
Position
3:34310925..34312061
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AA seq
378 aa
AA seq
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MRIVRKDLMPNGPGSVKMIPVDSDDLWFAYNLVAAGDSVLAVTVRKVVRQTKSGGKDAER
VKLKLEIKVEALDYDKEGSALRISGKNILENEHVKIGAFHSLEIELHRPFVLTKDVWDSV
ALDTLHQASDSAATADLAIVLMQEGLANIFLVGRSMTITRSRIETSIPRKHGPAVARYES
ALNKFFDSVLHAFLKHVDFNVVRCAVIASPGFTKDQFHRYLLLEAERRQLRPIIANKSRI
VIVHTSSGYKHSLREVLDASNVMNLIKETKAAQEVKVLKEFFNMLSNDPTRACYGPKHVE
VAHERMAVQTLLITDDLFRNFEIATRKKYVDLVNSVKDSGGTAHIFSSMHVSGEQLGQLT
GVAAILRFPLPDLEDIEM
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgttcgcaaagacttgatgccgaatgggcctggtagtgtcaagatgatcccg
gttgattcagatgatctttggtttgcttacaatctcgtagctgctggagattctgtcttg
gccgtcactgtcaggaaagttgtaagacagacgaaatctggtggaaaagatgcagaacgt
gtgaagcttaagttggaaatcaaagttgaggctttggattatgacaaagaaggatccgca
ttgcgtattagtggaaagaatattttagagaatgaacatgttaaaatcggagccttccat
tctttggaaattgagctgcatcggccatttgttttgacaaaggatgtttgggactcagtg
gcattagatacacttcatcaggcatctgattctgccgccaccgcagatcttgctatcgtt
ttaatgcaagaaggattagcaaatatctttcttgtcggtagaagcatgaccatcactcgt
tcaagaattgaaacttcaattcctcgcaagcatggtcctgctgtcgcccgttatgagtcg
gctttgaataagttctttgacagtgtgctacatgctttcctaaaacatgttgatttcaac
gtggtacgttgtgcggtgattgcaagtcccggtttcacgaaagaccagtttcatcgttac
ctactgctagaggcagagcggagacaattgagaccaattattgcgaacaaatcccgaata
gttattgttcatacgagttcaggatacaagcatagcttgagagaagttttggatgcttca
aatgtaatgaacttgatcaaagagactaaagctgcacaagaggttaaagttctcaaggaa
ttttttaacatgctttcaaatgatcctacacgtgcatgttatggaccaaagcatgtagag
gttgcccatgaacggatggccgtgcaaacgctgctcattacggatgatcttttcaggaat
tttgaaatagcgacaaggaagaagtatgttgatttggtaaattcggttaaggattcagga
ggcactgctcatatattttcatccatgcatgtctcaggagaacaactgggacaattgact
ggtgtagctgcaattcttcggttccctctaccagatttagaagacattgagatgtga
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