KEGG   Citrus sinensis (Valencia orange): 102616786
Entry
102616786         CDS       T02983                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102616786
Enzymes [BR:cit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     102616786
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    102616786
SSDB
Motif
Pfam: Sec63 DEAD WHD_SNRNP200 DExH14_plug ResIII Helicase_C DEXQc_Suv3 T2SSE TBSV_P22
Other DBs
NCBI-GeneID: 102616786
NCBI-ProteinID: XP_052294596
LinkDB
Position
3:complement(join(8011926..8012015,8012640..8012771,8012848..8012997,8013918..8014088,8014273..8014440,8014597..8014692,8015256..8015318,8015406..8015571,8015663..8015730,8016249..8016392,8016480..8016635,8017364..8017429,8017515..8017706,8017833..8017982,8018833..8018923,8019643..8019731,8020889..8020951,8021072..8021197,8021275..8021364,8021992..8022114,8022212..8022328,8022433..8022636,8023087..8023167,8023397..8023477,8023581..8023682,8023772..8023996,8024099..8024254,8024492..8024704,8026691..8026840,8027761..8027883,8027989..8028054,8029759..8029824,8029978..8030109,8030200..8030274,8030373..8030456,8030543..8030695,8030811..8030876,8042061..8042222,8042318..8042434,8042528..8042599,8043362..8043421,8043503..8043619,8049621..8049917,8050015..8050119,8050253..8050318,8050423..8050873,8051162..8051336,8051448..8051509,8052389..8052498))
AA seq 2093 aa
MLLQLPRLTNSLREPFDIDQAYLQRKSILQNLQKPRNTTNSLDESETARKIVYRWEEAST
EVRQVYKQFIGAVVEFIDGEMPSEEFGEIALSAYHLFGRPAEEEDNSVNRNIVEKKSKMQ
TLIGHAVSDASVYKVASLAQRLSKLQPSEHNVTLFSESLGNGSSDDFEFGSDLVFQAPAR
FLVDGSFEDGALMGDESIAPSSFHDGWYDGSDSMDYNSAADGRNFNLSWLRDACDRIVRQ
SISQLSRDDLAMAICRVLDSDKPGEEIAGDLLDLVGDSAFETVQDLISHRKQLVDAIRHG
MLLLKSEKTASNSQSRMPSYGTQVTVQTESERQIDKLRRKEEKRHRRGTEYAAENDVSST
SFSSLIEASERKNPLDGLIGSGQGSMAVTALPQGTVRKHLKGYEEVIIPPTPTAQMKPGE
KLIEIKELDEFAQAAFHGYKSLNRIQSRIFQTVYYTNENILVCAPTGAGKTNIAMISILH
EIGQHFRDGYLHKDEFKIVYVAPMKALAAEVTRTFSSRLSPLNMIVRELTGDMQLSRNEL
EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE
STQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAAR
NELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQL
SLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGV
NLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDRSGEGIIITSHDKLAYY
LRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIG
WDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVE
TYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGK
ISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAV
DRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQY
LGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYHSE
LFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQART
SHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTI
SAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMA
LLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYIS
SQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPR
MNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQ
MVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPA
HLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFL
YEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEA
EGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPD
TSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHF
SRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQD
SALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDLQRFPRIQV
KLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYA
LKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVEQLVI
NT seq 6282 nt   +upstreamnt  +downstreamnt
atgttgctacaacttcctcgcttgacaaattctctgagagagccgttcgatatcgaccag
gcctatctccaacgcaaatcgattctccagaatcttcagaagccgcgcaataccacaaac
tcgcttgatgagtcagagactgcacgaaagatagtatatcgatgggaagaagcttcaacc
gaagtgcgacaagtttacaaacaatttattggggcggttgtggaatttattgatggagaa
atgccttctgaagagtttggtgagattgcattgtctgcttaccatctttttggtaggcca
gcagaggaggaggataacagtgttaatagaaacattgttgagaagaagtcaaaaatgcaa
acattaattggtcatgctgtttctgacgcgagcgtgtataaagttgcttctctagcacaa
aggctttctaaattgcagcctagtgaacataatgttactcttttttcagaaagccttggg
aatggaagtagtgatgattttgaatttggctcagatctcgtttttcaagcacctgctagg
tttctggttgatggttctttcgaagatggggcattaatgggtgatgaaagcattgcacct
tcctcatttcatgacggctggtatgatggtagtgattctatggattataattctgctgct
gatggacgaaatttcaatttaagttggttaagagatgcatgtgatcggatagttagacaa
agtatttcacagctttctcgagatgatctagcaatggccatttgtcgagtacttgactca
gacaaacccggcgaggagatagctggtgatttattagatctggttggtgatagtgcattt
gaaactgttcaagaccttatatcgcatcgaaagcaacttgttgatgccatacgtcatgga
atgctgttactgaaatctgagaagacagcttcaaattctcaatcacgcatgcctagttat
ggaacacaggttactgttcaaacagaatctgaacggcaaattgataaacttcggcgcaag
gaagagaagcgacatagacgtggaactgaatatgcagctgagaatgatgtgtcatctaca
agtttttcttctttaattgaagcaagtgaaaggaaaaatccattggatggtttgattgga
tctggccaagggtccatggcagttactgctcttcctcaaggaactgtgcgaaagcacttg
aagggctatgaggaggttattatccccccaacacctacggcacaaatgaaacctggagaa
aagctgattgagataaaggaattagatgagtttgctcaagctgcttttcatggctataaa
tcgctgaaccgcattcagagtcggatatttcaaactgtttattacacaaatgagaacatt
ctagtttgtgctccaactggagctggcaaaacaaatatagctatgatttctattctacat
gagataggacagcactttagggatggatacttacataaagatgaatttaagatagtttat
gttgcccctatgaaggcattagctgcagaggtcacaagaacattcagcagtcgtttgtcc
ccactaaatatgattgtgagagagcttactggagacatgcaactttctaggaatgaactt
gaagaaactcagatgatagtgacaacacctgagaaatgggatgttattactcgcaagagc
agtgacatgtccctctcaatgctggtgaagctcttaattattgatgaagtgcatctttta
aacgatgacagaggccctgttatagaggcacttgttgctcggaccctgcgtcaggtggag
tcaacacagaggatgatacgtattgtgggcctgtcagccactttaccaaattatttggag
gttgcgcagtttttgagagtgaatccagagatgggcctcttcttctttgattctagttat
cgtcccattccacttgcacaacagtatattggaattagtgagccgaattttgcagctcga
aatgaattattgagtgaaatatgctataagaaggttgttgattcattaaggcaaggtcat
caagctatggtatttgttcattcacggaaggatactgtaaaaacagctcagaaactggtt
gatcttgctcgaagatatgaagatctcgaggtctttaacaatgatacacatccccagctt
tccttaatcaagaaggacgttatgaagtccagaaataaagatcttattgaactttttgga
cttgctgttggtgttcatcacgctgggatgttacgttctgatagaggtctgactgagcgt
cttttttcggaaggactcttgaaggtgcttgtctgcactgccacattggcatggggtgtt
aatctgcctgctcatactgttgtcattaaggggacccaattatacgatccaaaggctggt
gggtggcgagacctgggaatgcttgatgttatgcagatctttggaagggctgggagacct
cagtttgacagaagtggtgaaggcatcataatcacctctcatgataaattggcttactat
ctccggttgctgacaagtcaactgccaatagaaagtcagtttattagttccttgaaagat
aatctaaatgctgaggtggcattgggtactgtgaccaatgtcaaggaagcttgtgcatgg
cttggttatacctatctttctatccggatgaaattaaatcctttggcatatggtatagga
tgggacgaggtaattgcagatccgtctttaagtttaaagcaaagagctcttgtaaccgat
gctgcgcgtgcacttgacaaagctaaaatgatgcggtttgatgagaaaagtggcaacttt
tactgtacagagcttggtcgcattgccagccatttttatattcaatattctagtgttgaa
acatacaatgaaatgttgagacgccacatgaatgacagtgaggtaattgaaatggtttcc
cactcttctgagtttgaaaatattgttgttcgagatgaggagcagaatgagttggagaca
ttagtacagacattatgcccagtagaagttaaaggtggtccttcaaacaaacatgggaaa
atctcaattcttattcagttgtacatatcacgtgggtggatagatacattctcattagtc
tctgatgctgcttatattagtgcaagtttggctcgtattatgcgggctttatttgagact
tgtttgcgtagagggtggtgtgagatgtctttgttcatgttggaatattgcaaggctgtg
gatcgccaaatctggcctcatcaacatccactcagacaatttgataaggagctcccggca
gaaatattgaggaaacttgaagaacggggggctgacctagatcgcctgcaagagatggag
gaaaaagacattggggcgctgattcgttatactcctgggggaaggttggtgaaacaatat
ttaggatatttcccttcaatccagttgtctgctactgtgagtccaatcaccagaactgtt
ttaaagattggtttggcaataactccagagttcacatggaaagatcattttcatggtgct
gcgcagcgttggtggattattgttcaggattctgagagtgaccacatttatcactcagag
ctttttacattgacaaagcgaatggctagaggggaaacacagaagctttccttcactgtg
ccaattttcgaaccacatcctccgcaatattacatccgtgctgtgtctgattcttggttg
catgccgaggcattctactgtatatcttttcataatctggctttacctcaggctcgtact
tcacacacagagctcttagatctaaaacctcttcctgtgacagcacttggaaacaatatt
tatgaagccttgtacaatttttcacattttaatccgatacaaacacagatctttcatatc
ctgtatcacacagacaataatgttctcctaggagcacccactggaagtgggaaaacaata
tctgctgagcttgctatgctccatctcttcaatactcaatctgacatgaaggttgtttat
atagcaccattgaaggcaattgttcgggagagaatgaatgattggaaagatcgtcttgtg
tctcagcttgggaaagagatggttgaaatgactggagattatactcctgatttgatggcc
ctattgtcagcagatatcattatatctactcctgagaagtgggatggtataagtcgtaat
tggcacagtcgaaattatgtcaaaaaggttggacttatgattttggatgagattcactta
ctgggtgctgaacgaggacccatcctcgaggttattgtatcaaggatgagatacatatca
tcacaaacagagcgtgcagtacggttcattggtctttcgacagctctggcaaatgcgggt
gatttggctgattggctgggtgttggagaaattggactcttcaatttcaaaccaagcgtg
aggcctgtacctcttgaagttcatattcagggatatcctggaaagttctactgcccaaga
atgaatagcatgaataaaccagcatatgctgcaatatgcacccattcaccgaccaaacca
gttcttatatttgtttcatctcgtcgccaaacaaggcttaccgcattggaccttatccaa
tttgcagcttcagatgaaactccaaggcagtttctgggtatgccagaagaagatctacaa
atggttctttctcaggtcactgatcagaacctgcggcaaaccttacagtttggtattggg
ttacaccatgctggactgaatgacaaagacagatctcttgttgaagaactttttgcaaac
aacaagattcaggtgttggtttgtactagcacattggcatggggagtaaatcttcctgct
catttggttattattaagggaacagaatattacgatggaaaaacaaagagatatgttgat
tttcccatcactgatatcttgcaaatgatgggtcgtgctggccgcccacaatatgatcag
catgggaaagcagtaattcttgttcatgaaccaaagaagagcttctacaaaaagtttctg
tatgaaccatttccagttgagagtagtctgagggaccagttgcatgatcacttcaatgca
gagatagtgtctggaacaatttttcataaggaagatgcagtgcattatctttcatggact
tacttgttccgtagactggccattaatccagcctactatggattagaggatacagaagct
gaaggcctgagttcatatttgtctaggttagtgcagaatacatttgaagatctggaagat
agtggatgcgtcaagatgactgaagacactgtggagccaacaatgctgggcacaatagca
tctcagtattacctcagctatgtgactgtatcaatgtttggatctaatataggaccagat
acatctctagaggtgttcttgcatattctttctggtgcttctgaatatgatgagcttcct
gtgcggcataatgaggataatcacaatgaagcattgtcccagagagttcgatttgcggta
gacaataatcgcctggatgatccacatgtcaaagcaaatctgctatttcaggcacatttc
tctcggttagatttacctatcagcgactatgtcactgacttgaagtcggtgttggatcaa
agtatacgcatcatccaggccatgatagatatatgtgctaacagcgggtggctttcaagt
tcaatcacttgcatgcatcttttgcaaatggttatgcagggcctatggtttgaacaagat
tctgcgttgtggatgtttccatgcatgaacaatgatcttttaggtacgctaagagcaaga
ggaatttccactgtgcagcaactcttggatattccaaaggaaaatttgcaaacggtgatt
ggaaatttccctgtttcaagattacatcaggatctgcaacgtttcccaagaattcaagtc
aaattaagacttcagagaagggatattgatggtgaaaattcactaactctaaacatcaga
atggataagatgaattcatggaagaacacatccagggcttttgctcttcggttcccgaag
ataaaagatgaagcttggtggttggttcttggtaacaccaacacctcagaattatatgct
ttgaagagaatttctttctctgatcgcttaaatacccacatggagttgccatcaggcata
accacttttcaggggatgaaactggttgtagtttcagattgttatcttggttttgagcaa
gaacattccattgaagcccttgttgaacaattagtaatataa

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