KEGG   Citrus sinensis (Valencia orange): 102616813
Entry
102616813         CDS       T02983                                 
Name
(RefSeq) UBP1-associated protein 2B-like isoform X2
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102616813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102616813
   03041 Spliceosome [BR:cit03041]
    102616813
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102616813
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102616813
Spliceosome [BR:cit03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    102616813
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 SRA1
Other DBs
NCBI-GeneID: 102616813
NCBI-ProteinID: XP_006464302
LinkDB
Position
7:complement(join(28006343,28007320..28008581))
AA seq 420 aa
MAKINKVKKLKQATTSQKPNKKILKKEPKSLKKPEPPPVAAAAATSSSCSSSSESESEPE
SESISSLLEPYSKDQLIDLITAAATKIPLLHDHILETADRDVSQRKIFVHGLGWDTTQES
LLSAFGGSGEIEECKLVIDKVTGKAKGFAFIVFKTRKAAVKALKNPQRKVNNRMASCQLA
SVGPTGAGVKEQGAAAQGERKIYVSNVPRDVEKEKLRGFFERFGEIETGPIGFDITTGKS
RGFAIFVYKTVEGARKALEEPQKMFEGHQLQCQKAAEGKNRTSSNSSSSNNQAQMMIQKQ
QQPMLQGQQQGQGNEQEQVLAAMAAAQNLALFGQHPGMHPLYGGFLVNPGLINPMVAGAL
HQGAIPASNVGAMAGSSVLGSFGPGAAQGLQQQQHVYPNAPQSKTQGTGGGSFPGYTSYM
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggcgaaaatcaacaaagttaagaaactaaaacaggcaactacgagccaaaaacccaac
aaaaaaatactcaaaaaagaacccaaatccctcaaaaaacccgaaccgcctcccgtagcc
gccgccgccgccaccagcagcagctgcagctcatcgtccgaatcggagtctgaaccggag
tcagaatccatttcaagcctcctcgaaccttactccaaggaccagctcatcgacctcatc
accgccgccgccacaaaaatcccgcttttgcacgaccacattctcgaaacggccgacagg
gacgtgtcccagcggaaaatattcgttcacgggctcggatgggacacgacgcaggagagt
ttgttgtcggcgttcggaggttccggagaaatcgaggagtgcaagttggtgatcgataag
gtgaccggaaaggcaaaagggtttgcttttattgtgttcaaaacgaggaaagcggccgtg
aaagcgttgaagaatccgcagaggaaggtgaataaccgaatggcgtcttgccagctggcg
tcagtgggccccactggtgccggggtgaaggagcagggggcggcggcacagggggagagg
aagatttatgtgagcaatgtgccgagagatgttgaaaaggagaaattgagggggtttttt
gagagatttggtgagattgaaaccggaccgatagggtttgatattaccactgggaagtca
agaggatttgcaattttcgtgtataaaactgttgagggagcgaggaaggctttagaggag
ccgcagaagatgttcgaagggcatcagttgcaatgccaaaaggcagctgagggaaagaac
aggacgagtagtaatagtagtagcagtaataatcaagcacagatgatgattcagaagcag
caacagccaatgcttcaggggcaacagcaagggcaagggaatgagcaggagcaggtgctt
gctgctatggcagcagcacagaatttggctttgttcgggcagcatccgggaatgcatccg
ttgtatggagggtttttggtgaatcctgggttgattaatccaatggtggctggtgcattg
catcagggtgcaattcctgctagtaatgtgggtgcaatggctggttcgtcagtgcttgga
tcattcgggcctggtgctgctcaggggttgcagcagcagcagcatgtttatccgaatgct
ccgcagagtaagactcaggggactggtggtgggtcatttcctgggtatacttcatatatg
tga

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