KEGG T02983: 102617000

Citrus sinensis (Valencia orange): 102617000

Entry

102617000         CDS       T02983

Name

(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X1

K12489

Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein

Organism

cit Citrus sinensis (Valencia orange)

Pathway

cit04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:cit00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102617000
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102617000
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102617000
Membrane trafficking [BR:cit04131]
Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    102617000
Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    102617000
Exosome [BR:cit04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102617000

SSDB

Motif

Pfam:

BAR_3 ArfGap Ank PH Ank_2 BAR Ank_3 Ank_5 Ank_4 PH_11 PH_8 ANK_LRRK2 PH_20 SOS1_NGEF_PH

Other DBs

NCBI-GeneID:

102617000

NCBI-ProteinID:

XP_006484646

LinkDB

Position

4:complement(join(21993291..21993402,21993540..21994003,21994616..21994706,21994860..21994981,21995608..21995874,21996001..21996087,21996706..21996921,21998362..21998493,21998672..21998887,22001131..22001172,22001271..22001366,22001472..22001519,22002462..22002527,22003795..22003839,22004428..22004490,22005187..22005257,22005417..22005517,22005602..22005678,22005758..22005805))

AA seq 787 aa
MSAFIKLEDSPMFQKQLFSMEESAEELKDRCQRLYKGCKKFTEALGVACSGDSAFADALE
AFGGGHDDPVSVSIGGPVISKFISAFRELATYKELLRSQVEHVLINRLTEFLTVDLHDAK
ESRRRFDKSIHAYDQAREKFVSLKKNTRDDIVAELEEDLQNSKSAFEKSRFNLVSALTNI
EAKKKYEFLESISAIMDVHLRYFKLGFDLLSKIEPYVHQVLTYAQQSKEVANVEQDKLAK
RIQEFRTQAELDNLGVPVDVEHSVSADGIHVGGTVSYKNIEAVMRSSATGEVQTIKQGYL
LKRSSNLRGDWKRRFFVLNSQGTLYYYRNKGIKSMGSHHHYAGSADHNGGVFSRFRSRHY
RSSSFNEDSLNCRTVDLRTSAIKMDAEDTDLRLCFRIISPVKTFTLQAETEADRMDWTSK
ITGVIASLLNSDLLQQLRPSAKHIDGNDPFSTRDVPSLSSHCSLEDEVKANKSDSVSAIL
RQIPGNDLCAECSAPDPDWASLNLGILLCIECSGVHRNLGVHISKVRSLTLDVKVWESTI
LDLFGSLGNAYCNSIWEGLLLLKDREVDKSNTTIPSVRKPCSKDVFHYKEQYIHAKYVEK
LLVIRDTSDAKSRTTSIWEAVKTQNLQEVYHLIVTSDANIINTTFDDVVGVDSYHHVDNT
QYSEIDFHKVKKEENNGPAGCQRIKDSNDPGNCLQGGSLLHLACQCGNLVMLELLIQFGA
DINMRDFHGRTPLHHCISSKNYTFAKFLLRRGARPSIKDGGGLSSLERAMEMGAITDEEL
FILLAES

NT seq 2364 nt +upstreamnt +downstreamnt
atgtctgcgtttatcaagctcgaggattccccaatgtttcaaaagcagttattttctatg
gaagagtcagctgaggagttaaaagatcgttgccaaagactgtataaaggctgcaagaag
tttacggaagctcttggagtagcgtgtagcggtgacagtgctttcgcagatgcattagaa
gcttttggcggtggacatgatgatcctgtcagtgtttcaattggaggtccggttatctcc
aagttcattagtgcatttcgtgagcttgctacatataaagagcttcttcggtcccaagtt
gagcatgtgttaattaatcggctgacggaatttttgactgttgatctgcatgatgcaaag
gaatcccgtcggcgctttgacaaatctatacatgcttatgatcaggcacgtgaaaagttt
gtgtctttgaaaaagaatacacgagatgacattgttgcagaactagaagaggatctacag
aactcaaagtcagcatttgagaaaagccgttttaatttagttagcgcactcacaaatatt
gaagcgaaaaagaagtatgagttcttggaatctataagtgcaattatggatgtgcatttg
agatatttcaagctgggatttgacttgttgagcaaaatagagccatacgtccaccaggtg
ttgacttatgcgcagcaatccaaagaagtggctaatgttgaacaagataaacttgcaaaa
cggattcaggaatttaggacccaagcagagttggacaacttgggagttccagttgacgtg
gagcattcagtaagtgctgatggcattcatgttggtggtacggtctcttacaagaacata
gaagcagttatgcggtctagtgccacaggggaagtccagacaatcaaacaagggtatctc
ttaaagcgttcctcaaatttgaggggagattggaagaggaggttctttgtactcaatagt
caagggactttgtattactaccgaaataagggtataaaatctatgggttctcaccatcat
tatgctggttcagctgatcacaatggtggcgtatttagtagattccgttcaaggcactat
aggtcatcttcattcaatgaagacagcctgaattgccgtactgttgatcttcgtacttca
gcaataaaaatggatgcagaggatacagatctacgactctgcttcaggataatttctcct
gtgaaaactttcacattgcaggctgaaacagaagcagacaggatggactggaccagcaag
ataactggtgttattgcatctcttttgaattctgacttgttgcaacagttacgtcctagt
gcaaaacatattgacggaaatgatcccttcagtactcgtgatgttccatcacttagtagt
cattgcagtctagaggatgaagtgaaagccaataaatctgatagtgtttctgcaatcctt
aggcaaattcctggaaatgatctttgtgcagagtgtagtgctcctgatcccgattgggca
tcacttaatcttggcatattgctgtgcattgaatgctctggtgttcaccggaatcttggc
gttcatatatcaaaggtgagatctcttacgttggacgtcaaggtctgggaatctacaatc
ttggatctatttggttctttgggtaatgcatattgcaactccatatgggagggattgctt
ctgctcaaggatcgagaagtggacaaatcaaatactaccattccatcagttaggaaacct
tgctccaaagatgtttttcattacaaggagcaatacattcatgcgaagtatgtggagaaa
ttgctagtcattagagatacatctgacgctaagtctcgcaccacaagcatttgggaagca
gttaaaacccagaatttgcaagaagtataccaccttattgtgacatcggatgcaaatatc
atcaataccacctttgatgatgtggttggtgttgattcgtatcaccatgttgataataca
caatactcagaaattgattttcacaaagtgaaaaaggaagaaaataatggtccagctggt
tgtcagagaatcaaggattccaatgatcctgggaattgtcttcaaggtggttcattattg
caccttgcatgtcagtgtggcaaccttgtgatgcttgaacttctgatacaatttggtgct
gatataaatatgcgtgacttccatggaaggactcccttgcaccattgcatctcctcaaag
aattacactttcgcaaagttcctacttagaagaggtgcacgtccatcaattaaggatggt
ggagggctaagttcgctagaaagggcaatggagatgggagcaattactgacgaagagcta
tttattttgcttgctgaaagctag

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