Citrus sinensis (Valencia orange): 102617233
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Entry
102617233 CDS
T02983
Name
(RefSeq) protein HIRA isoform X2
KO
K11293
protein HIRA/HIR1
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cit03036
]
102617233
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
102617233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
102617233
NCBI-ProteinID:
XP_006487972
LinkDB
All DBs
Position
8:join(24998253..24998360,24999381..24999656,24999966..25000217,25000295..25000692,25000864..25001881,25004030..25004234,25004371..25004611,25004791..25004913,25005123..25005240,25006146..25006703)
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AA seq
1098 aa
AA seq
DB search
MIAEKPSWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLA
TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT
LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSTGICTAVLRGHSSLVKGVAWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT
VANFHFEVKELGHRLSDAELDELKRSRYGDVRGRLANLAETPAQLLLEAASAKETTTKKV
VSDVQAIQAPVKSSVNIGVTTKTSEPQTDNGKKSGGIAGDGLNKVSTSGRISSPVKQREY
RRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMKEVSV
RGTVGRSSDAKERSGVTARATITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAATTT
TLSIRVFDKKEGEDNVPVCLEARPREHAVNDIVGMGSTCMMKETEIACTRGSQTLWSDRI
TGKVTVLAGNINFWAVGCEDGCLQVYTKCGRRAMPTMMMGSAATFIDCDESWKLLLVTRK
GSLHVWDLFNRKCLLHDSLGALITTDPNSASKGTIKVISAKLSKAGSPLVVLATRHAFLF
DTNLMCWLRVADDCFPASNFVSSWNFGSIQSGELATLQVDVRKYLARKPGWSRVTDDGVQ
TRAHLEAQLASSLALKSPNEYRQCLLSYIRFLAREADESRLREVCESFLGPPTGMAEAAS
SNAKNIAWEPCVLGMRKHKLLREDILPAMASNRKVQRLLNEFMDILSEYESTETILDQKD
PAPPAISAPPATDQMDTDPPAADKMDTDPPKTDQMDTGPLATDQMDVTALASDRIDSAPS
QTDQLDSAPSQTDQLDCAPSATDQMGSTTSAADHSNSASLETDQANSVSSDTDQVHMFQL
PSVTDQVNVTPAVRDFGS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgagaaacccagttgggttaggcatgagggaatgcagattttttccattgat
gtacagcctggtgccctcaggtttgctactggtggaggtgaccacaaggttcgtatatgg
aacatgaaatctgttggcaagaactttgaaaatgatgaatcaacccagaggcttcttgca
acccttcgcgatcattttgggtcagttaactgtgttaggtgggctaagcacggtcggtat
attgcatcaggttctgatgatcaggttattttgattcatgagaaaaagcctggttcagga
acaacagagtttggtagtggagagcccccagatatagagaactggaaagtcgcaatgact
ttaagaggacacactgccgatgtggtggatctcaattggtctccagatgactcgatattg
gctagtggaagtctggacaacacaatccacatctggaacatgagcactggtatttgtact
gctgttcttagaggccactctagcctggttaaaggagtcgcttgggatcccattggctct
ttcatagctagtcaatctgatgataagactgtcattatatggcgaacaagtgactggagt
cttgctcacagaacagatggccactgggcaaaatcacttggttctacattcttcaggcgg
cttggatggtctccctgtggccatttcataacaacaactcatggtttccagaagcctagg
cattctgcacctgttctagagagaggtgaatgggcggcaacatttgatttcttaggacac
aatgcccctattatagtggtgaagttcaatcattcaatgttcagaaggaattccgccagt
tcacaggaagtgaaagctgcccctgttggatggacaaatgggacttccaagattggaggg
aaagaatcgcagccgtataacgttattgcaattggaagtcaggatcgtactataactgta
tggacgactgctagtccccgtcctctttttgttgccaagcattttttcactcaaagtgtt
gtggatttatcctggagtcctgatggttattctctttttgcctgttccttagatgggaca
gtggctaatttccattttgaggtgaaagagcttggccacaggctaagtgatgctgaactt
gatgagttaaagagaagtcgttatggcgatgtcagaggtcgactggcaaatcttgcggag
actccagctcagttattgcttgaagcagcatcggctaaggaaaccacaactaaaaaggtg
gtttctgatgttcaggcaattcaggcaccagtaaagtcttctgtcaatataggggtcaca
acaaagacttctgagcctcaaactgacaatggaaagaagagtgggggaattgccggtgat
ggattaaataaagtgtcgacttctggccggatttctagtcctgttaaacaaagagaatac
agaagacctgatggtagaaagaggattattccagaagcagtgggagtaccagttcagcag
gaaggtgttactggtggtgctcaatctcagttgcatgacttccctcctgtgtcatccgat
cacagaaaggataataatggggtagttcctgctgatggcgttatgaaagaagtttctgtc
aggggaacagtgggcagaagctctgatgcaaaggagcgttctggagttactgccagggct
actattactgagagcctggttattgagaaggttccagcatctgcagctggggatggaaat
gttggtgtagaacaatctgggaatgtgaaggcttctggctcagttgctgctactactaca
actctttctattagagtatttgataagaaagaaggggaagataatgttccagtttgcttg
gaagcccgtcctagagaacatgctgtaaatgacattgttggaatgggaagtacatgtatg
atgaaagaaacagaaattgcctgcacaagaggatctcaaactctttggtctgataggata
acagggaaagtcactgttttagctggcaatataaatttctgggctgttggctgtgaagat
ggatgcctacaagtttatacaaagtgcgggagacgagccatgccaaccatgatgatggga
tctgctgcaacatttattgactgtgatgagagttggaaattgttacttgtcacaaggaag
ggatcattacatgtatgggatctcttcaacaggaagtgtctgcttcatgactcattgggg
gctctgattactactgacccgaattcagcttctaaaggcacaatcaaagtcatatctgcc
aagctatcaaaagcaggttctcctcttgttgttctggctacacgtcatgcattccttttt
gacacgaatctcatgtgttggctgagggttgcggatgactgctttcctgcatcaaatttt
gttagctcctggaattttggttcgattcagagtggcgagctggctacgttgcaggtggat
gttaggaaatacttggcgagaaagccaggctggagcagggtaactgatgatggagtgcag
acacgtgctcatttggaagctcagttggcatcttcgttggctttgaaatctccaaatgaa
tatcgccagtgcctcctttcctacattcgcttcttagcaagagaagcagacgagtctcgt
ttacgagaagtctgtgaaagttttcttggacctccaactgggatggctgaagccgcatcc
tcaaatgcaaagaacatagcttgggaaccctgtgtactcggaatgagaaagcacaaactt
ttaagagaggatattcttccagcaatggcatcaaataggaaagtccagcggttgctcaat
gagtttatggatatcttgtctgaatatgagagtactgaaactattttagaccaaaaagat
cctgcaccgcctgctatatctgctccaccagcaactgatcagatggacactgacccacca
gcagccgataagatggacacagacccaccaaaaactgatcagatggacactggtccacta
gcaactgatcaaatggatgttaccgcactagcgtctgatagaatagactctgccccatca
caaactgatcaactggactctgccccatcacaaactgatcaattggactgtgccccatcg
gcaactgatcaaatgggttccactacttctgctgcagatcacagcaattctgcctcctta
gaaacagatcaagcaaattctgtctcatcagatacggatcaagtacatatgtttcaatta
ccatcggtgacagatcaagttaatgtgaccccagctgtaagagattttggctcttga
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integrated database retrieval system
