Citrus sinensis (Valencia orange): 102617245
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Entry
102617245 CDS
T02983
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102617245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102617245
03012 Translation factors [BR:
cit03012
]
102617245
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102617245
Translation factors [BR:
cit03012
]
Eukaryotic type
Release factors
102617245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
17kDa_Anti_2
Motif
Other DBs
NCBI-GeneID:
102617245
NCBI-ProteinID:
XP_006468958
LinkDB
All DBs
Position
2:7809645..7810958
Genome browser
AA seq
437 aa
AA seq
DB search
MSDGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALELGAVEILIVWENLDINRYVLKNSATGEIVIKHLNRDQEADQSNFRD
AATSAELEVQEKTSLLEWFANEYKQFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSYDELSDDGGVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatggtcaggaaaccgataagaacattgagatatggaaaatcaaaaaattgatc
aaggcactggaatctgcaagaggtaatggaaccagtatgatatcccttattatgcctccc
cgtgatcaaatttctcgggtcacgaagatgcttggtgatgaatttggaactgcttcaaac
attaaaagtagggtcaaccgtcagtctgttctggctgctattacttctgctcagcagagg
ctgaagctatataacaaggttcctcccaatgggttggtgctttatactggaacagttgtt
actgacgacggcaaggaaaagaaagtgacaattgactttgagcctttcaagcctataaat
gcatcgttgtatctctgtgataacaagtttcacactgaagccttgaatgaactcttagaa
tctgatgacaaatttgggtttattgtcatggatggaaatggcaccctatttggcacatta
agtggaaacacaagagaggtgcttcataagtttactgttgatctgccgaagaagcatgga
agaggagggcagtcagctcttcgctttgctcgtcttcggatggagaaacggcacaactat
gtgaggaagacagcagagcttgctacacagttctttatcaatcctgctaccagtcagccc
aatgtgtctgggttaattcttgctggttctgctgatttcaaaactgagctgagccagtct
gatatgtttgatcctcgtttacaagccaagatattgaatgttgttgatgtttcttatggt
ggggaaaatggttttaaccaagcaattgagttgtctgcagaaatcttatcaaatgtgaag
ttcatacaagaaaaacgtttgattggaaaatactttgaggagattagtcaggacactgga
aaatatgtgtttggtgttgatgacactctgaaggctctggaattgggtgctgtagaaatc
cttattgtgtgggaaaatctggatatcaataggtatgtactgaaaaacagtgctactggt
gaaattgttataaagcacttaaacagagaccaagaggccgatcagagcaacttccgcgat
gcagccacatctgctgagttggaggttcaggaaaagacatctttactcgagtggtttgcc
aatgagtacaaacagtttggttgtacgcttgagtttgttaccaacaaatcccaggagggc
tcacagttttgcagagggtttggtggaattggtggtatacttcgctaccagcttgacata
agatcatatgatgagctatctgacgatggaggtgtttatgaggattctgattag
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