KEGG   Citrus sinensis (Valencia orange): 102617306
Entry
102617306         CDS       T02983                                 
Name
(RefSeq) protein VACUOLELESS1
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cit00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    102617306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102617306
Membrane trafficking [BR:cit04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    102617306
   Hops complex
    102617306
SSDB
Motif
Pfam: Vps16_N Vps16_C WD40_WDHD1_1st
Other DBs
NCBI-GeneID: 102617306
NCBI-ProteinID: XP_006484899
LinkDB
Position
4:complement(join(19090393..19090557,19090972..19091069,19091191..19091293,19091473..19091602,19092380..19092561,19093350..19093404,19094067..19094140,19094281..19094388,19094957..19095070,19095182..19095271,19096122..19096214,19096292..19096397,19097489..19097628,19098173..19098463,19098552..19099322))
AA seq 839 aa
MANVSVAAEWQLVYNRYYRKPELYQMRWKHIDLSRNKVACAPFGGPIAVIRDDSKIVQLY
AESALRKLRIFNSAGVLISETVWKNPGGRLIGMSWSEDQTLICVVQDGTVYRYNIHAELI
EPNASMGKECFEENVVECVFWGNGVVCVTEANRYFCMADFATMKVCELARPEVEELPHCV
AVIEPKYTMTGSVEVLIGTDAGILMLDEDGVQKVDDTLSQKMAVSPNGNFVACFTHDGRL
VVNNTNFSSPVIDESCESALPPEQIAWCGMDSVLLYWNDMLVMVAPQAEPVQYFYDEPLV
LIPECDGVRILSNSSMEFLQRVPASTEQIFAIGSTSPAALLHDALDHFDRRSAKADENLR
LIRASLPKAVEACIDAAGHEFDISRQRTLLRAASYGQAFCSNFQRDRIQEMCKTLRVLNA
ARDPEIGIPLSIQQYKSLTASVLIGRLINANCHLLALRISEYLGMNQEVVIMHWACSKIT
ASLAIPDVTLLEILLDKLKLCKGISYAAVAAHADKSGRRKLAAMLVEHEPRSSKQVPLLL
SIGEEDTALVKATESGDTDLVYLVIFHIWQKRPALEFFGMIQTRSLACDLFTVYARCYKH
EFLKDFFLSTGQLQEVAFLLWKESWELGKNPMASNGSALHGPRIKRIEKAHSLFSETKEH
TFESKAAEEHAKLLRIQHELEVSTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKTEFKVS
EKRWYWLKVFALATKRDWDALERFSKEKRPPIGYRPFVEACVDADEKGEALKYIPKLVDP
RERAEAYARIGMAKEAADAASQAKDGELLGRLKLTFAQNAAASSIFDTLRDRLSFQGVS
NT seq 2520 nt   +upstreamnt  +downstreamnt
atggccaacgtttcggtggccgcggagtggcagctcgtctacaaccggtactaccgtaag
cccgagctctaccaaatgagatggaaacacatcgacttgagccgcaacaaagtcgcctgc
gccccgttcggcggtccgatcgccgtcatccgcgacgactccaagatcgtccagctctac
gccgaatccgccctccgcaagctccgcattttcaactctgccggcgtcctcatctccgaa
accgtctggaaaaaccccggcggacgcctgatcggcatgtcctggtccgaggaccaaacc
ctgatctgcgtcgtccaggacggcacagtctaccgctacaacatccacgcggagctcatc
gagccgaacgcgtccatggggaaagagtgcttcgaggagaacgtggtggagtgcgtgttc
tgggggaacggcgtcgtttgcgtgacggaggcgaataggtacttctgcatggcggatttt
gcgacgatgaaggtttgcgagctggcgaggccggaggtcgaggagctgccgcattgcgtg
gccgtgatcgagcccaagtacacgatgactggcagtgtggaggtgctgatcggaactgat
gctgggatattgatgctggatgaagacggcgtgcagaaagtcgatgatacgctgtcgcaa
aagatggccgtttcccccaatgggaatttcgtagcttgtttcactcacgatggtcgcctt
gtcgttaacaataccaacttcagctcccctgttatcgacgagtcttgtgagtcagcactc
cctccggagcagatagcgtggtgtgggatggacagcgtacttctttattggaatgatatg
ttggtgatggtggctcctcaagcagagcctgtgcagtacttttatgacgagccactagtt
ctcatcccagagtgtgatggagtgaggatattgtccaactcgagtatggaatttctgcaa
cgggttcctgcttctaccgaacaaatctttgcaattggaagcacgtcacccgcagcttta
cttcatgatgccttggatcattttgacaggagaagtgccaaggcagatgaaaatttgagg
ttaatacgtgcgtccttgcccaaggccgttgaagcatgtatcgatgctgctggtcatgaa
tttgatatttctcgtcaaaggacactgttgagagccgcaagctatggccaagccttttgc
agcaattttcaacgcgatcgtattcaagagatgtgcaaaactttgcgggttttgaatgct
gcgcgtgacccggagattggcatccctctcagtatccagcagtataagtcacttacagca
tcagtgttgattggtcgtttgattaatgccaattgccacctccttgcactgcgtatatca
gagtaccttgggatgaaccaagaggtggtgattatgcactgggcttgttccaagataaca
gcttcattagcaattcctgatgtcactctcctggaaatcttgcttgacaagcttaaacta
tgcaaaggcatatcctatgcagcagttgctgctcatgcagataagagtggtcgccggaag
ttagctgctatgcttgttgaacatgaacctcgatcttccaaacaggttcctctcttgtta
agcataggagaggaagataccgctttggtgaaggcaactgaaagtggagatactgatctt
gtatatcttgttatatttcacatttggcaaaagaggcctgccctggagttttttgggatg
atacaaacaagatcgctagcatgcgatttatttacagtttatgcacggtgttataagcat
gaattcctcaaggatttcttcctatcaacaggacagcttcaggaggtggcttttcttctc
tggaaagaatcatgggaactcggaaaaaatcctatggcaagcaatggatctgcccttcat
ggtccacgcataaaacgaattgagaaggcgcatagtctcttctcagagaccaaggagcac
acttttgagtcaaaagcagctgaagaacatgcaaaattgttgagaatccaacatgagtta
gaagtgtctaccaaacaagcaatatttgttgattcaagcataagcgacactattcgcaca
tgtattgtgctgggaaatcatagagctgccatgaaagtgaagacagaattcaaggtttct
gagaagagatggtattggcttaaagtttttgctttggctacaaaaagagattgggatgcc
ctggagaggttctcaaaggagaagagaccaccaattggttacaggccatttgtcgaagca
tgtgtagatgcagatgagaaaggtgaagcactcaaatatattccaaaacttgtagatcct
cgagaaagagctgaggcttatgcccggattggtatggccaaagaagctgctgatgctgct
tcacaagcaaaggatggtgaattgcttggtcgattgaaattgacatttgcacaaaatgct
gcagcttcatcaatttttgatactcttcgagatagattgtccttccaaggtgtttcttag

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