Citrus sinensis (Valencia orange): 102617340
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Entry
102617340 CDS
T02983
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102617340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cit04040
]
102617340
Ion channels [BR:
cit04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102617340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Ycf70
Motif
Other DBs
NCBI-GeneID:
102617340
NCBI-ProteinID:
XP_006490679
LinkDB
All DBs
Position
9:join(1215820..1215821,1215917..1216466,1216579..1216791,1217217..1217497,1217705..1217816,1217939..1218175,1218397..1219077,1219305..1220009)
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AA seq
926 aa
AA seq
DB search
MSRFFDLEGGTARESSGEINYGSSSAGRVLKPRVRRRLALEIERIRTNRQVSKAPKSRYG
IVGKSMLYLKIVLSPHGPLWNWIFLISCLIAISLDPLFLYIPVISDEKKCLRLDNKLGTA
AIFLRSFLDFFHIIYVIFRLRTKSFAPCWEYPQRSLNEYAQEITRKYLLFFLPIDLLAIL
PLPQVVVSVIIQTTRGSKVLSGLKLLKFFVIFQYVPRLIRIYPLFTNVTRTSCKLDESKF
FKAAFNLLLYMVASHVFGALWYFFAIVREVACWKSACINHTGCSHASFYCHDTAGNNTFV
KDFCPTKPQNTSIFDFGIFQDALQSGIVEVTDFPQKFSHCFLWGLQNLSCFGQNLQTSSY
FWENFFAIVITISGLVFFLYLIGNIQIYLQSKTIRSEEMRLKGQEIEQWMGFRKLSRDLQ
QKLRNYRQYVWRETKGVDVENLLNNLPSDLKRNIKSELGLELLLNVPLFQNLDAKTLDDI
CSYLKPVLYAEESHIVLEGDRIDGMLFVMRGKLWSATMVGGRMSFQSGFYLSAGDYYGEE
LISWALDPNSSHYLPISSRTVRAATEVEAFVLMSDNLRAVTSELSRRLCYKQLHHAFRVY
SHQWRTWAACSIQAAWRRYKRRNLEEFLNAEENRLQGEWAAGGGITSSLGATIYPSRFAA
HALLAAQSNRSLLLQKPAEPDFRLAFRKMLMTDFKMPLFQSLDAKTLDDICIYLKPVLYE
KKSWIFREGRPVDKTLFIMQGKLDSMTSNNINGGTLGGFFNLAHLGTGDLCGEELLTWAL
DPQSSFRPPNSTRTVVARTEVEAFALTTDDLKAVASKSRRLRSKLLRHTYRFYSQQWRTW
AACSIQAAWSQYKLQKLQREKENRVQLQDTLAKASGSSPSSEATLFVSRLFATDAPRSGA
RKTRLLEKVPFVPNLKPVEPSTAEEQ
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggttctttgatttagagggaggtaccgcaagggagagctctggtgaaatcaac
tatggaagtagtagcgctgggagagttttgaagccaagagttcggcgacgcttagccctt
gaaatagaaaggatcaggaccaatagacaagtatcaaaagctccaaaatctcgttatggc
attgtgggcaaaagcatgctttatctaaagatagtccttagcccacatggtcctttgtgg
aattggattttccttatttcctgtttgattgcaatttcactggatcctctgttcttatac
attcctgtaatcagtgatgaaaagaagtgccttcgactagacaacaagttggggactgcg
gctatttttctccgttcgttcttggatttctttcacataatctacgttattttccgattg
cggacgaagtcttttgctccttgttgggaatatcctcagcgaagtctaaatgaatatgcc
caggaaattacaaggaaatatttgctgttcttcttgccaattgatcttctggccattctt
ccactcccacaggtggtggtttcggttatcattcaaacaacaaggggctcaaaagttttg
agtggattgaaattgttaaagttttttgttattttccagtatgtgccaaggttaatccgg
atctacccattgtttacaaacgttacaaggacttcatgcaaacttgatgaatctaaattc
ttcaaagctgcgttcaatcttcttctttatatggttgcaagtcatgtttttggagccttg
tggtatttttttgccatagtaagagaggtagcgtgctggaagagtgcctgtataaatcat
actggatgcagtcatgcttccttctactgtcatgacactgcggggaacaacacttttgta
aaggatttttgccctacaaaaccacaaaatacatctatatttgatttcggaatattccaa
gatgctcttcagtctgggattgtagaggtgacagattttccacagaagttctctcattgc
tttctatgggggctccaaaatctcagttgttttggtcaaaaccttcaaacaagttcctac
ttttgggaaaacttctttgccattgtgattaccatttctgggttggtgttctttctctat
ctcattggaaatatacagatatatctacagtcaaaaactataagatcggaggagatgaga
ctcaaggggcaagagatagagcagtggatgggttttagaaagctctctagggatctccag
cagaaacttaggaattatcgacaatacgtatggcgagaaaccaagggtgttgatgtagag
aatttgcttaataatctccccagtgacctcaaaaggaatattaagagtgaactaggctta
gaactgctcctgaatgtgccattgtttcaaaacttggatgcaaaaactctagatgacatc
tgcagctatctcaagccagtgctttacgcagaggaaagccacattgttctggagggtgat
agaattgatgggatgctctttgtgatgcgaggcaaattatggagtgccactatggtgggt
ggaagaatgagttttcaaagcggtttctatctcagtgctggtgactactatggggaagaa
ctaatctcatgggctctagatcctaactcctctcattacctccccatctcaagtagaact
gtcagagctgccacagaagttgaagcatttgttttaatgtctgataacttgagggctgta
acctcggagttatcgaggaggctttgttataagcagcttcaccatgctttcagggtttac
tcgcaccagtggaggacttgggcagcttgttctatacaagcagcttggcgccgctataaa
agaagaaacctggaagagtttctgaatgccgaagagaataggttacaaggtgaatgggct
gcaggtggtgggattacttcaagtttaggtgctacaatttacccatcacgatttgcagct
catgcacttcttgctgctcagagcaaccgttctttgctacttcagaagccagcggagcct
gattttaggcttgcttttaggaaaatgctcatgactgatttcaagatgccactgtttcaa
tcattggacgcgaaaactctggatgatatttgcatttatctgaagccggtcctgtacgaa
aagaaaagctggatttttcgggagggcaggccggttgataagacgctcttcatcatgcaa
ggcaagttagattccatgactagcaataatattaatggtggaacacttggaggtttcttt
aacttggcacatcttgggaccggtgacttgtgtggagaagaacttctcacatgggctctg
gatcctcagtcttcatttagaccccccaactcaaccagaactgtagtagcccgtacagaa
gttgaagcgtttgctctaacgactgatgacctgaaggctgttgcttccaaatcaagaagg
cttcgcagcaagcttcttcggcatacctataggttttactcgcagcagtggaggacttgg
gcagcttgttccatacaagcagcttggagccaatataagctacagaagcttcaacgtgaa
aaagagaatagggtgcaattgcaagacacattggctaaggccagtggaagttcgccaagt
tcagaagccaccctttttgtatcacgactgtttgctactgatgcaccgcgcagcggcgct
cgtaaaacaaggttgctggagaaagtgccgttcgtgccaaatctgaagccagtggaacct
agcactgctgaagaacagtag
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