KEGG   Citrus sinensis (Valencia orange): 102617380
Entry
102617380         CDS       T02983                                 
Name
(RefSeq) lysine-specific demethylase JMJ17 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cit01009]
    102617380
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cit03036]
    102617380
Enzymes [BR:cit01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102617380
Protein phosphatases and associated proteins [BR:cit01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102617380
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102617380
SSDB
Motif
Pfam: PLU-1 JmjC PHD JmjN zf-C5HC2 ARID KDM5_C-hel PHD_UBR7-like PHDvar_NSD PHD_5 Reovirus_bridge Zn_ribbon_PaaD
Other DBs
NCBI-GeneID: 102617380
NCBI-ProteinID: XP_006476601
LinkDB
Position
3:complement(join(2012299..2012545,2012724..2012923,2012998..2013093,2013248..2013343,2014351..2014500,2014727..2014871,2015462..2015535,2015619..2015739,2016074..2016207,2016305..2016454,2016608..2016686,2017059..2017120,2017268..2017450,2017774..2018109,2018215..2018374,2018501..2018632,2018743..2018801,2019038..2019102,2019214..2019421,2019525..2019641,2019728..2019814,2020038..2020133,2020262..2020327,2020609..2020800,2020908..2021060,2022073..2022255,2023367..2023453,2023546..2023704,2024509..2024648,2024765..2024822,2025026..2025148,2025492..2025549,2026044..2027380))
AA seq 1850 aa
MGKGRTSAVLGQKLSVASTSKSASLSVPSGPVYYPTEDEFKDPLEYICKIRAEAERYGIC
KIVPPKSWKPPFALDLGSFTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHIGTKLN
KKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNGKISDCARHVLCQLYY
KHLYDYEKYYNKLNKEATKGCKRGLDGDVKSEDKVERSSSKRRRRNNGDQERVKVCHKVD
KEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDS
FGFVPGKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLD
TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL
YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD
LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW
LPHGGFGADLYQQYHKAAVLSHEELLCVVAKVSDLDSKVSPYLKRELLRVYTKERMWRER
LWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLC
ECKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQISSSNRPTTLTKKVKGVR
VTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLIEARRW
AEGIRDCLHKAENWSSLPGSDSEKVHLDCVNELLGFDPLPCNEPGHLILKNYAEEARSLI
QEINAALSACSKISELELLYSRASGLPIYIVESEKLSQRISSAKVWRDSVRKCISNKCPA
AIEIDVLYKLESEALDLKIEVPQTDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQE
LGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRI
QVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLA
AAMRWEERAADILIRKAQMCEFEDIIRASQDIFVVLPSLDEVQNEVSTAKSWLKNSELFL
ASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDA
RCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKK
ALSFLSVSPSLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVIFAPCKFKRC
KLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLK
ELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLY
IYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ
YFESESVSQFGGSPLRFGGKRSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVALECKTC
LTDIVKFESCYLDKDLHVISNKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKL
LEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSL
DKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL
LSAPEIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQ
KMLAIANNSSVFDCSSGIDNLWWHNRKPFRRAAKKRTVLDSLCPFIYTQQ
NT seq 5553 nt   +upstreamnt  +downstreamnt
atggggaagggaagaactagtgctgtgttagggcaaaaattaagtgtggcatcaacatca
aaatcagcatcattgagtgtaccatctgggccggtgtattatcctactgaagatgaattt
aaggacccattagagtatatttgtaaaattagggcagaggctgagcgttatgggatttgc
aagattgttccacctaaaagttggaaaccaccatttgctttggatttaggttcttttaca
ttccccacaaaaacacaggcaattcaccagttgcaagcaaggtcggccgcttgtgattct
aagacttttgagttggaatacagtaggtttttgaaggaacatattgggacgaagttgaat
aagaaggtgttctttgaaggcgaggagttggacttgtgtaaattgtttaatgcagcgaag
aggtttggagggtatgataaagttgtgaaggagaagaagtggggggaggtttttaggttt
gttaggtcaaatgggaagatttctgactgtgctaggcacgttttgtgtcaattgtactat
aaacatttgtatgattacgaaaaatattacaataagttgaataaagaggcgacaaaaggt
tgcaagagggggttagatggggatgtaaagagtgaagacaaggttgagcgttcgagctcg
aaaaggaggcggaggaataacggtgatcaggagagagttaaggtttgtcataaggttgat
aaggaggatgagcttgatcagatttgtgagcaatgcaaaagtgggttgcatggggaagtt
atgcttttgtgcgataggtgtaacaaggggtggcacgtttattgtttgtcacccccattg
aagcatgttcctcgagggaattggtattgcctagagtgcttgaattctgataaggacagt
tttggtttcgtgccaggtaagcggtatacagtggaatctttcagacgagtagctgatcgg
gccaaaaagaaaaggtttaggtcaggatctgcttcgcgtgttcaaatggagaaaaagttc
tgggaaattgtggagggagcagctggtaatgttgaagttatgtatggcagtgacttggac
acttccatttatggaagtggttttcctcgtgtatgtgaccatagaccagaatccgtggat
gccaatgtatggaatgaatattgtaatagcccgtggaatctaaataacctgccaaagttg
aaagggtcaatactccggatggttcatcataacattactggggtgatggtgccttggctt
tatcttggcatgttgttctcagctttttgctggcattttgaagatcactgtttttactca
atgaattatcatcactggggagatccaaaatgttggtacagtgtccctggaagtgaagct
ggtgcttttgagaaggttatgcggagtagccttcctgatctatttgatgcacaacctgat
ttgctctttcaacttgtcactatgttgaatccatcagtgttggtagaaaatggtgttcca
gtctacagtgtactacaggagcctggaaactttgtcatcacattccccagatcttaccac
gcaggatttaattttggtttaaactgtgcagaggctgtcaattttgctcctgctgactgg
ctacctcatggtggttttggagctgatctgtatcagcagtatcacaaagctgccgtttta
tctcatgaggagctcctttgtgttgtagccaaggttagtgatcttgatagcaaagtgtca
ccttatttgaagagagaattgctgagagtatataccaaagaaagaatgtggagagagagg
ctttggagaaaaggcatcatcaagtcaactcctatgggccctcggaaatgcccagagtat
gtgggtactgaagaggatccaacatgtattatatgtcggcaatatttgtatctcagtgct
gttgcttgccgttgtaggccagctgcttttgtgtgtttggagcactgggagcacctctgc
gaatgtaaaaccagaaaacttcatcttctttatcgtcataccttggcagaattgtatgat
ttgtttcttaccgttgatagaaatagttctgaggagacatcagaaagtaataatttaaga
agacagatctcatcttccaaccggccaactactttgaccaaaaaggtcaaaggtgttcgt
gttaccatgtctcagcttgttgaacaatggctttcttgttcacttaaggttcttcagggc
ctgttttctagtgatgcttatggcactcttttgagggaagctgaacaatttctttgggct
ggttttgagatggatgcggtccgggacatggtgaacaaattgattgaagctcggagatgg
gcagaagggataagagattgccttcataaagcagagaactggtcatctcttcctggctct
gattcagagaaagtgcacctggattgtgttaatgagttgcttggttttgatcctttgccg
tgtaatgagcctggacatcttatcctgaagaattatgcagaagaggctaggtcactgatt
caggaaattaatgctgccctctcagcttgttcaaagatttctgagttggagctattgtat
tccagagcttctggcttaccaatttatatagtagaaagtgagaagctatctcagagaatt
tcttctgcaaaggtctggagagacagtgtgagaaaatgcatctcgaacaaatgtcctgca
gcaatcgagattgatgttctttacaagttagagtcagaggcattggatctgaaaatcgaa
gttccacagacagatatgcttttgaaaatgatagggcaagccgaatcatgtagggctcga
tgcagtgaagcattgaggggttctatgagtctaaagactgttgaactgcttcttcaagaa
ctgggcgattttactgttaatatgcctgaattggagcttctaaagcaataccacagtgat
gccattttttggatcgcccgcttaaatgatattttggtgaacattaatggaaggaaggat
cagcacaatgtaattgatgaattaaattgcattttgaaagaaggagcatctttgagaatt
caagttgatgacttgcctcttgttgaggttgagctgaagaaggctcattgcagagagaaa
gctctgaaggcatgtgatactaaaatgcctctggacttcattcggcaggtgacggcggag
gctgtcatactacagattgagagagaaaaattattcattgatttgtctggagtactggcc
gctgctatgcgttgggaggaaagagcagcagatattcttatacgcaaggctcagatgtgc
gaatttgaggatattatcagagcttcacaagacatatttgtggttctaccttcgctagat
gaagtccaaaatgaagtatcaacagctaaatcatggttaaagaattctgagctattttta
gcttctgcgtttgctgtagcacctgcctcctgttctttgctgaggcttgagagtttgaag
gacttggtttctcagtcaaagtttcttaagatttcgttgaaagaacaaacagagcttgaa
aaagttataaataattgtgagagatggcaaaatcatgcctcttctcttctacaagatgct
agatgcttacttgataaagatgacattggtgatggtctgagcaacagtcttgtttcaaaa
attgaacagctaattacatcaatggaatccgctgcgaattgtggtttgtctcttggtttt
gacttccatgagatttcagaacttcaaaatgcatgttctaccctgcattggtgcaagaag
gctctttctttcctctctgtttctccttctttggaggatgtggagagcttgatggctgtt
gcagaaggcctttctaccagatgtttttcaagtatgttgtggaactctttgattcatggg
gttaaatggcttaaaagagcattggaagtcatttttgctccgtgtaagtttaaaagatgt
aagctgagtgatgttgaagaagttcttgctggatgtaagggaattaacttctcctttcca
gttgtgattggtgaacttacgagtgctattcagaaacacaagttgtggcaagaacaagtt
catcaattctttaatctcaagtgtgcgcaacaatcttggtctctgatgttacagctcaag
gaactaggagaagctgctgcttttgattgtccagagctagagaaggttctatccaaagtt
gataaggttgaaaactggaagcaacgctgcaaggaaattgtagggacttctgtaggagat
aagaattctttgcttggtcttttgcagaagatcaaacagtctgtacatagatcactgtac
atatataacaagccacatggttcagtatcgatgactctgtgtatgtgctgtgagagtgat
tccaaggagcttgaattcttaatttgctctgcatgcaaagactgctatcatttgcagtgc
ttaagaccaacagaagttgatagaaatcatgcagaagcctacatatgtccttattgccaa
tattttgagagtgaatcagtatctcagttcggaggcagccctctgagatttggagggaag
cgctctgatttgagaatgttgattgagcttctctcagattctgaatttttttgcagaggg
attgaagcaaaagatgtactgcaagaagttgtggatgtagctcttgaatgcaagacctgc
ttgactgatatagtgaagtttgaatcctgttatttggataaagatctccacgtcatctcc
aataaattaactatcactttgaaggccagggaagcagctggagttttcgatcgtcaaagt
aatagcgcacttgactttgcattagcgagaaacttgtggagagttagagttagtaagtta
ttagagggtttaacaaagcctacaattggacagatacaaaattatttgaaagagggactg
ttaatgaacatatcacccaaagatcactacaggcaaaagctgatggaactgaatcgcatt
ggctcgcagtgggcagatgttgccaaaaaggtagtactggattctggggctctaagctta
gataaagtctttgaacttattgcagagggagaaaatttgcctgtttacttggagaaggaa
cttaagtcactaagagctcgaagtatgctatactgcatctgtcggaagccctatgatgag
aaagcaatgatcgcttgttatcagtgtgatgagtggtatcatattgattgtgtaaaatta
ctttctgccccagagatttacatctgtgcagcatgtaagcctcaagcagaagagtcttct
actccacaaaatgtggatggtgggagaacaaacgctgaatttctagagcccaaaacacct
tctcctaaacacacaaactcgagaaagaaactgaggaaggctgagccaggcctagcgcag
aagatgctagcaatcgcaaataacagcagtgtatttgactgttctagtggaattgataac
ttatggtggcataataggaagcctttcagaagagcagctaaaaaacgcacagtgctggat
agtctctgtccatttatttacacacaacagtga

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