Citrus sinensis (Valencia orange): 102617383
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Entry
102617383 CDS
T02983
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03030
DNA replication
cit03410
Base excision repair
cit03420
Nucleotide excision repair
cit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102617383
03410 Base excision repair
102617383
03420 Nucleotide excision repair
102617383
03430 Mismatch repair
102617383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cit03032
]
102617383
03036 Chromosome and associated proteins [BR:
cit03036
]
102617383
03400 DNA repair and recombination proteins [BR:
cit03400
]
102617383
DNA replication proteins [BR:
cit03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102617383
DNA Replication Termination Factors
ELG1-RFC complex
102617383
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102617383
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102617383
Check point factors
HRAD17(Rad24)-RFC complex
102617383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Viral_helicase1
RCF1-5-like_lid
Mg_chelatase
Rad17
AAA_24
AAA_5
AAA_11
nSTAND3
AAA_assoc_2
AAA_25
AAA_19
AAA_28
DNAX_ATPase_lid
AAA_3
RuvB_N
ABC_tran
MeaB
AAA_30
AAA_7
AAA_18
bpMoxR
RNA_helicase
IstB_IS21
NTPase_1
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
102617383
NCBI-ProteinID:
XP_006477417
LinkDB
All DBs
Position
3:complement(join(7021908..7022018,7022115..7022309,7022391..7022519,7023076..7023271,7023552..7023653,7023753..7023859,7024405..7024560))
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AA seq
331 aa
AA seq
DB search
MASSSSSSSAYDIPWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKT
TSILALAHELLGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEA
DSMTAGAQQALRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDEEILSRLM
VVVQEEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHV
KNMVRNVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYEMAEHLKLEFMKEAGFA
HMRICDGVGSYLQLCGLLAKLSIVRETAKAV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcttcatcgagcagcagcgcctacgatatcccgtgggttgagaagtaccgg
ccgaccaaggtatgcgacatcgtcggcaacttagatgccgtcgctaggctgggtatcatc
gctcgcgacggaaacatgccaaatctaatcctggctggtccacctggaaccggtaaaaca
acaagtattttggctcttgcacatgagctgctgggaccaaattatagggaggctgtaatg
gagcttaatgcatcggatgacaggggtatagatgttgtcagaaacaaaattaagatgttt
gcccagaaaaaagtaacgctgcctccaggaaaacacaaagtagtagttcttgatgaggct
gatagcatgacagctggtgcacaacaagcactgaggcgtacaatggaaatttattcaaac
tccactcggtttgctcttgcctgcaatatatcttctaaaattatcgagcctattcagagt
agatgtgccattgttcgattttcgagattatctgacgaagagatacttagccgcctcatg
gtggtggttcaagaagaaaaggttccttatgtacctgaaggtcttgaagcaattattttc
accgctgacggtgatatgaggcaggcattgaacaacttgcaagctacatacagtggtttt
cggtttgttaaccaagaaaatgttttcaaggtctgtgaccagcctcatccattgcatgtg
aagaatatggtccgcaatgtgcttgaggggaaatttgatgatgcttgttctggtctaaag
cagctctatgatttgggttactcccctaccgatattatcacaacccttttccgaatcatt
aagaattacgaaatggctgagcacctgaaattggaatttatgaaggaagctgggtttgcc
catatgagaatctgtgatggagttggctcatatctacagctatgtggtctcctagctaag
ctttctatagttcgtgaaacagctaaagcagtataa
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integrated database retrieval system
