Citrus sinensis (Valencia orange): 102617391
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Entry
102617391 CDS
T02983
Name
(RefSeq) LEC14B protein isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102617391
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102617391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Cytochrom_D1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
102617391
NCBI-ProteinID:
XP_006479825
UniProt:
A0A067H6F9
LinkDB
All DBs
Position
3:complement(join(44614507..44614701,44615577..44615637,44615849..44616007,44616226..44616401,44617439..44617516,44617887..44618063,44618524..44618601,44619230..44619349,44619546..44619964,44620058..44620085,44620537..44620542))
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AA seq
498 aa
AA seq
DB search
MKDEEALRSCIASGVDFDEMGYAMSRFEIESEFYDAADTVNQASNSRSKFKKPLSALDHE
IAQLTKLKSEPKEHFSKEVPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLP
VNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVT
DTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSL
KFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTSDVNTVCFGDESGHLIYSGSDDNL
CKVWDRRCLNVKGKPAGVLMGHLEGITFIDSRGDGRYLISNGKDQAIKLWDIRKMSSNAS
CNLGFRSYEWDYRWMDYPPQARDLKHPCDQSVATYKGHSVLRTLIRCHFSPVYSTGQKYI
YTGSHDSCVYVYDLVSGEQVAALKYHTSPVRDCSWHPSQPMLVSSSWDGDVVRWEFPGNG
EAAPPLNKKRIRRRQFYL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatgaagaggctctaagaagctgtatagcaagtggagttgactttgacgaaatg
ggatatgccatgagtagattcgagatagaatctgaattctatgatgctgccgatactgtc
aatcaagctagtaatagtcgtagcaaattcaagaaacccttgagtgctttagaccatgaa
attgcccagctcacgaagctgaaatcggaacccaaggagcattttagcaaagaagtacct
gggaagcggcacttgcctgtttccactgtgaaaatgttggctggtagggaaggcaattat
tcaggaagagggaggttctcagctgcagattgttgtcatatgcttagtagatatttgcct
gttaatgggccctggcctgtggaccagacaactagccgagcatatgtctctcagttttcg
gctgatggttctttatttgttgctggatttcaggctagtcaaattagaatctatgatgtg
gagagaggttggaaaatacagaaagacattcttgctaaaagtttgcgttggacagtcaca
gatacatctctttccccggatcagcgccatcttgtttatgcaagcatgtcacctatagtg
cacattgttgatgttggttctgggacaatggagtctcttgcaaatgttacggagatacat
gatggattggacttttctgctgcagatgacggagggtattcttttggtatcttctctctg
aagttttcaaccgatgggcgagaacttgttgccggaagcagtgatgattgtatatatgta
tatgatcttgaagcaaataagctttctctcagaattttggcgcacacgtctgatgttaac
actgtatgttttggtgatgaaagtggccatctaatctattctgggagtgatgacaatcta
tgcaaggtatgggatagacgctgtctaaatgtgaaagggaagccagcaggagtcctgatg
ggacacctagaagggatcacgttcattgatagccgtggagatggtcgttatctgatctca
aatggtaaagatcaggccatcaaactttgggatattcggaaaatgtcctctaatgcatcc
tgcaatttaggatttaggagttatgaatgggattacagatggatggactacccaccccag
gcaagagatttgaaacacccatgtgatcaatccgttgctacgtataaaggtcattctgtc
ttgcgtactcttatccggtgccacttttcccctgtatacagcactggccaaaagtatatc
tacactggatcccatgattcttgtgtttatgtttatgacctggtgagtggtgagcaagtt
gctgcactcaagtaccatacttcacccgttagagactgtagttggcacccaagtcaacca
atgcttgttagctcttcttgggatggagatgttgtcaggtgggagtttccgggtaatgga
gaagctgctcctcctctaaacaagaagaggatccggaggagacagttttacttgtga
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integrated database retrieval system
