Citrus sinensis (Valencia orange): 102617406
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Entry
102617406 CDS
T02983
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04141
Protein processing in endoplasmic reticulum
cit04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102617406
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102617406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cit03110
]
102617406
04131 Membrane trafficking [BR:
cit04131
]
102617406
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cit04091
]
102617406
Chaperones and folding catalysts [BR:
cit03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
102617406
Membrane trafficking [BR:
cit04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
102617406
Autophagy
ER-phagy
Other ER-phagy associated proteins
102617406
Lectins [BR:
cit04091
]
L-type lectins
102617406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF4834
OAD_gamma
DUF359
FAM176
CFAP143
Motif
Other DBs
NCBI-GeneID:
102617406
NCBI-ProteinID:
XP_006485059
LinkDB
All DBs
Position
4:join(17887913..17888008,17888123..17888192,17888931..17890057,17890147..17890218,17890307..17890417,17890526..17890666)
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AA seq
538 aa
AA seq
DB search
MVQRMAVSLRFALLLFAAFVSFQLISASDDATILYESYDESFDGRWIVSQKDEYKGVWKH
SKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLR
PQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSD
KLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIPDPDDKKPEDWDER
AKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLDDDPEEIDDPEATKPEDWDDEEDGEW
EAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFEL
DKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVEKEKLKAEEA
AAGSDGLAGFQKKVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVII
TVLFKIIFGGKKAKVEPPKETEAAESSSSKQEDSGEKEEETEKEETAAAPARRRRRDN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagagaatggctgtctctctgcggttcgctctcctgcttttcgctgctttcgtt
tcatttcaattgatctccgcttctgatgatgccacgatcttgtacgagtcgtatgacgag
tcgttcgacggacgatggatcgtttctcagaaagatgaatacaaaggtgtatggaagcat
tcaaagagtgagggtcatgaagattatggccttcttgttggtgagccggcaaagaagtac
gcgatagtgaaggagcttgatgagcccctgagtttgaaggatggaactgttgtcctccag
tatgaggttcgcctccagaatggtcttgaatgtggtggtgcatatctgaaatacctgcgg
cctcaggaggcaggttgggtatccaaggagttcgacaatgaatctccgtatatgattatg
tttggacctgataaatgtggtgcaacaaacaaggtgcacttcatcttaaagcataagaat
cccaagagtggagagtacattgaacaccatctcaagaacccaccttctgtgccctctgat
aaactgactcatgtatacactgccatcttgaaacctgataatgagttgagaattttaatt
gatggagaggagaagcagaaggcaaatttcctcgctgctgatgattttcagccaccgctc
attcctgagaagacaattcctgatccagatgacaagaagcctgaggattgggatgagagg
gcaaagattcctgaccctgatgcagtaaaacctgaagactgggatgaggatgctcccatg
gaaattgaagatgaggatgctgtgaaacctgaaggatggctggatgatgaccctgaggag
atagatgaccctgaggccacaaaacctgaggattgggatgatgaggaggatggtgaatgg
gaggccccaaagattgataacccaaagtgtgaagcagcccctggatgcggcgagtggaag
aggccaatgaagaggaatcctgcctacaagggcaaatggcatgctccacatattgacaac
cctaattacaagggtatttggaagcctcagcagattccaaaccccaactattttgagctt
gacaaacctgactttgagcctattgctgctgttggcattgagatctggacaatgcaggat
ggtattttgtttgacaacattttgatatcaaaggatgagaaagttgcagagtcctatcgg
gcttctgcatggaagcctaagtttgatgttgagaaagagaaactgaaggctgaggaagca
gctgctggttcagatggccttgcaggcttccagaagaaggtatttgatctcttgtacaag
gttgcagacattcctttcttggatgcatacaaacttaagatcattgatgtgattgagaag
ggagagaaacaaccaaaccttacaattggtatccttgtctctgttgtggcggtgatcatc
acagttctgttcaagatcatttttggtggaaagaaggctaaagtagagcccccaaaagaa
acagaagctgcagagagttcctcgagcaaacaagaggacagtggtgaaaaggaagaagag
accgagaaggaagaaactgctgctgctcctgctcgtcggaggagacgcgataattaa
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