Citrus sinensis (Valencia orange): 102617561
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Entry
102617561 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102617561
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03022
Basal transcription factors
cit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102617561
09124 Replication and repair
03420 Nucleotide excision repair
102617561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102617561
03400 DNA repair and recombination proteins [BR:
cit03400
]
102617561
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102617561
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102617561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
PLU-1
Motif
Other DBs
NCBI-GeneID:
102617561
NCBI-ProteinID:
XP_006474034
LinkDB
All DBs
Position
9:complement(join(33274280..33274540,33274851..33274916,33275022..33275125,33275213..33275286,33275804..33275868))
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AA seq
189 aa
AA seq
DB search
MVISSSNPQNRELAIRKRIASIYNKREEDFPSLKEYNDYLEEVEDMIFNLVEGVNVHEFE
EKIQEYQKENAEQIMINQARKAEELAAALAASKGISAQDDTNGDPSQSALGGIGVGGTQG
QYVPTLAGGQPRPTGIPQPIAHAGGMDLHSYDNEAMMKLRAERGGRAAGWSMELSKKRAL
EEAFASIWI
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggtaatctccagttccaatcctcaaaacagggagctggcaatcaggaagaggatcgct
agcatatacaataagcgagaagaggattttccatcattgaaagaatacaatgattacttg
gaggaagtggaggacatgatattcaacttagttgaaggagtaaatgtacatgaatttgag
gagaaaattcaagaataccagaaagaaaatgcagaacaaataatgataaatcaagctcgg
aaggcagaagaacttgctgcagctctggcagcaagcaaaggaatttctgcacaagacgat
accaatggggatccaagccagagtgctcttggaggcattggtgttggtggtacacaggga
caatatgtccctacgcttgctggaggacagccgagaccaacaggaattccacagcctata
gctcatgcaggtggcatggacttacacagttatgacaatgaggctatgatgaaacttcga
gcagagagaggtggaagggcagcaggatggagcatggagctgagcaagaaaagagcactc
gaggaagcctttgcaagcatttggatttaa
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