KEGG   Citrus sinensis (Valencia orange): 102617793
Entry
102617793         CDS       T02983                                 
Name
(RefSeq) uncharacterized protein LOC102617793 isoform X1
  KO
K20221  importin-4
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102617793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cit03009]
    102617793
Ribosome biogenesis [BR:cit03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    102617793
  Pre-60S particles
    102617793
SSDB
Motif
Pfam: TPR_IPO5 HEAT_EZ HEAT HEAT_GCN1 TOR1L1_N TPR_IMB1 HEAT_EF3_N HEAT_2 Vac14_Fab1_bd IBN_N HEAT_ECM29 HEAT_GCN1_C HEAT_MROH2B_C RIX1 Cnd1 mTOR_dom MMS19_C TPR_DNAAF5 HEAT_GCN1_C_2 IFRD Importin_rep_6 CLASP_N ParcG PPP2R1A-like_HEAT HEAT_IPO9_c INTS7_N HEAT_Maestro Dopey_N Tti2 Cnd3 ARM_TBCD_2nd DUF4042 TPR_CAND1 TPR_TTI1_N
Other DBs
NCBI-GeneID: 102617793
NCBI-ProteinID: XP_006484649
LinkDB
Position
4:complement(join(22034418..22034618,22034732..22034836,22034970..22035105,22035289..22035401,22035503..22035598,22035702..22035922,22036019..22036141,22036249..22036279,22036761..22036801,22037353..22037441,22037595..22037839,22037925..22038014,22038095..22038310,22038417..22038551,22038627..22039130,22039286..22039498,22040094..22040139,22040246..22040382,22040836..22040968,22041097..22041371))
AA seq 1049 aa
MAQSLELLLIQFLMPDNDARRQAEDQIKRLAKDPQVVPALVQHLRTAKTPNVRQLAAVLL
RKKITGHWAKLSPQLKQLVKQSLIESITLEHSAPVRRASANVVSIIAKYAVPAGEWPDLL
PFLFQFSQSEQEEHREVALILFSSLTETIGQTFRPHFADMQALLLKCLQDETSNRVRIAA
LKAIGSFLEFTNDGAEVVKFREFIPSILNVSRQCLASGEEDVAVIAFEIFDELIESPAPL
LGDSVKSIVHFSLEVSSSHNLEPNTRHQAIQIISWLAKYKYNSLKKHKLVIPILQVMCPL
LAESNEAGEDDDLAPDRAAAEVIDTMALNLAKHVFPPVFEFASVSCQNASPKYREAAVTA
IGIISEGCAEWMKEKLESVLHIVLGALRDPEQFVRGAASFALGQFAEYLQPEIVSHYESV
LPCILNALEDESDEVKEKSYYALAAFCEDMGEEILPFLDPLMGKLLAALENSPRNLQETC
MSAIGSVAAAAEQAFIPYAERVLELLKIFMVLTNDEDLRSRARATELLGLVAESVGRARM
EPILPPFVEAAISGFGLEFSELREYTHGFFSNIAGVLEDGFAQYLPLVVPLAFSSCNLDD
GSAVDIDGSDDENINGFGGVSSDDEAHCERSVRNISVRTGVLDEKAAATQALGLFALHTK
SSYAPFLEESLKILVRHASYFHEDVRYQAVFALKNILTAAHAIFQSHNEGPAKAREILDT
VMNIFIRTMTEDDDKDVVAQACTSIVEIINDYGYMAVEPYMSRLVDATLLLLREESTCQQ
PDNDSDIEDDDDTAHDEVIMDAVSDLLPAFAKSMGPHFAPIFAKLFDPLMKFAKSSRPLQ
DRTMVVATLAEVARDMGSPIAAYVDRVMPLVLKELASPDAMNRRNAAFCVGELCKNGGES
ALKYYGDILRGLYPLFGDSEPDDAVRDNAAGAVARMIMVNPQSIPLNQVLPVLLKVLPLR
EDFEESMAVYNCISTLVLSSNPQILSLVPELVNLFAEVVVSPEESSEVKSQVGMAFSHLI
SLYGQQMQPLLSNLSPAHATALAAFAPKS
NT seq 3150 nt   +upstreamnt  +downstreamnt
atggcgcaatccttagaattgttgttgattcaattcctgatgccggacaacgacgcgcga
cggcaagcggaggaccagataaagcggctggcgaaggatcctcaggtggtccctgctctt
gttcagcaccttcgcactgccaagactcccaacgttcgccagctcgccgcagtactcctc
cgtaagaagatcaccggtcattgggccaagctatctcctcaactcaagcagctcgttaag
cagtctctcattgaaagcatcaccctcgaacacagtgcacctgtacgtcgtgctagtgca
aatgttgttagtattattgcaaaatacgctgttccagcgggagagtggcctgatttgttg
ccctttctattccaatttagtcagagtgagcaagaagagcatcgagaggtggcgctgatt
ctttttagctctttaactgaaacgattggacaaacatttcgaccacattttgctgatatg
caagctcttttactcaaatgcttacaggatgagacaagcaaccgcgttagaattgctgct
ctcaaggcaattggctcttttctagaattcacaaatgatggggctgaagtggttaaattt
cgggaatttattcctagtattttaaatgtgtcaagacaatgcctggcttctggtgaagag
gatgttgctgtaattgcttttgaaatttttgatgagttgattgaatcccctgcacctctt
cttggggattctgtcaaatccatagttcatttctctcttgaagtttcctcaagccataat
ttggaacccaacacacgtcatcaggctattcaaatcatttcctggttggcaaagtacaaa
tacaattccttgaaaaagcacaagctggttatcccaattctgcaagtcatgtgcccattg
cttgctgaatcaaatgaggcaggtgaagatgatgatcttgcgccagatcgagctgctgca
gaagttattgacactatggctttgaaccttgcaaagcatgtttttccccctgtttttgag
tttgcttctgtaagctgtcaaaatgctagtcccaaatatagggaagctgctgttacagct
ataggcatcatttccgagggttgtgcggagtggatgaaggaaaagctggaatctgttctt
catattgtcttgggagctctgagggatccggagcagtttgtaagaggagctgcctcattt
gcattgggtcaatttgctgaatatttgcagcctgaaatagtatctcactatgaaagcgtt
ctgccttgcattttgaatgcccttgaggatgaatctgatgaagtgaaggagaagtcttac
tatgctttggcagctttttgtgaggatatgggtgaggaaattcttccttttcttgatcct
ttgatggggaagctactggcagcacttgaaaatagcccccgcaatctgcaggagacatgc
atgtctgccattggttcagtagctgctgctgcagagcaagctttcattccatatgctgaa
agggttcttgagttactgaagattttcatggtgcttaccaatgatgaggacctccgttcc
cgagctagggctactgagcttcttggattagttgcagagtctgttgggagagcaagaatg
gaaccaattttgccacctttcgttgaagctgctatatctggttttggattggaattcagt
gagcttagggagtacacccatggattttttagcaacattgcaggggttctagaggacggc
tttgcacagtatctacctcttgttgtacccctggcattttcttcctgcaatctggatgat
ggttctgctgtggacattgatgggtctgatgatgagaatattaatggatttggtggagtt
tcatccgatgatgaagctcactgtgagcgaagtgttcgaaatatcagtgtaagaactgga
gtgttagatgaaaaggcagctgcaacgcaagctcttggtttatttgcactgcatactaag
agttcctatgcaccctttttggaggagtcattaaaaattttggtgagacacgccagctat
tttcatgaagatgttagatatcaggctgtctttgctttgaaaaatattttgacagctgca
catgcaatcttccagagtcataatgaaggaccagccaaggcaagagaaattctcgataca
gtgatgaatatttttatcaggactatgactgaagatgatgacaaagatgtcgttgctcaa
gcttgtactagcattgttgagatcatcaatgattatggctacatggctgttgagccttat
atgtctcgactggttgatgcaaccctgctactgctccgagaggagtcaacttgtcagcag
ccagataatgacagtgatattgaagatgacgacgacactgcacatgatgaagttataatg
gatgcagtttctgaccttcttcctgcatttgctaagtccatgggtcctcactttgcacct
atctttgcgaagctatttgaccctttaatgaaatttgcgaaatcttcacgccctctgcaa
gaccggaccatggtggttgcaactttggctgaagttgctcgggacatgggttcgcctata
gctgcctatgttgatagggtgatgcccctagtactcaaagaactagcatcacctgacgca
atgaataggaggaatgcagcattttgtgttggagagttgtgcaaaaatgggggagagtca
gctttaaaatactatggtgatattttgcggggtctttacccattatttggggattctgag
cctgatgatgccgtcagggataatgcagctggtgctgtggcaaggatgataatggtcaac
ccgcagtccatcccgttgaatcaggtccttcctgttcttttgaaagttcttcctcttaga
gaagactttgaagaatcaatggctgtttataattgtatttccactctggttttgtcttca
aatccccagatcctttctcttgtacctgagctggttaacctttttgctgaagtagttgtt
tcaccagaggaatcttctgaagtgaagtctcaagttggcatggctttttcgcatctaata
tctctctacggccagcaaatgcaaccgttgttgagtaacctctcgcctgcacatgctact
gccctagctgcatttgccccaaaaagttga

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