KEGG   Citrus sinensis (Valencia orange): 102617834
Entry
102617834         CDS       T02983                                 
Name
(RefSeq) DNA topoisomerase 3-beta
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03440  Homologous recombination
cit03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102617834
   03460 Fanconi anemia pathway
    102617834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cit03032]
    102617834
   03400 DNA repair and recombination proteins [BR:cit03400]
    102617834
Enzymes [BR:cit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     102617834
DNA replication proteins [BR:cit03032]
 Eukaryotic type
  DNA Topoisomerases
   102617834
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     102617834
   FA (Fanconi anemia) pathway
     102617834
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_TOP3B Toprim DNA_ligase_ZBD Zn_ribbon_FGT1_2 DUF5795
Other DBs
NCBI-GeneID: 102617834
NCBI-ProteinID: XP_006492984
UniProt: A0ACB8HYZ2
LinkDB
Position
9:join(15408393..15408416,15408511..15408567,15408807..15408910,15410266..15410359,15411006..15411105,15411789..15412032,15415655..15415817,15415906..15416025,15418758..15418837,15422911..15423189,15428068..15428236,15428492..15428620,15428689..15428901,15431556..15431735,15432608..15433255)
AA seq 867 aa
MAPLKVLMVAEKPSIALSIATVLSGGKLYTRKASTEVHEFDGMFLGSHAYIKVTSVVGHV
FRLDFPPAYQDWNASNPLDLFQAPVHKAESNPKVHICRHLNQEARGCGHLVLWLDCDREG
ENICFEVIECTGFQVNDARRKVHRARFSSVTEKDILKAMGNLVEPNRNEALAVDARQEID
LKVGVAFTRFQTTYFQGKYGNLDSRFISYGPCQTPTLGFCVQRYLQITSFKPEKFWTLHP
YLVQNGYELKLEWERQKLFDFDVATMFQKLVMQDGILEVIDISEKQESKVRPCGLNTVNL
LKVASSALGYGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFRGTLSALANNPVWGDY
VERLLAEGYAKPRSGTDAGDHPPITPMRSATEDMLGKDAWRLYSYVCQHFLGTVSPDCKY
IRTKVKFSMGAEFFHCVGQHVTVQGFTYIMPWLAINEKKIPQFTKEEKIEVSKVELHEGN
TVPPEYLSESELITLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLAPTTLGITLIRG
YQCIDPDLCLPDIRSFIEQQITLVAKGQADHSGVVQHVLQQFRQKYSYFVKQIENMDALF
EAQFSPLSNSGRVLSKCGKCLRYMKYISMQPSRLYCSTCEDVYNLPQRGTLKLYKELTCP
LDNFELLIFSMAGPEGKSFPLCPFCYNNPPFEGIDTLYGTTTTGSFGKLGKGAGMPCFLC
PHPACRHSMMAQGVCACPECNGTLVLDPVSAPKWRLYCNMCNCLVSLPQGAHRIATTQEQ
CPECGSKIIEIDFNKKTTPLDDGATLHTGCILCDELLHSLIEVKHGKSFFKRLGGRGRGR
GAGRGAFKGRGRGTGKGVDRKMSFRDF
NT seq 2604 nt   +upstreamnt  +downstreamnt
atggctcctctcaaagttctcatggttgccgagaagcctagcatagctctctcaatcgct
acagtcctctctggtggcaaactatataccagaaaagcaagtacagaggttcatgagttt
gatgggatgtttcttgggtctcatgcttatatcaaagtcacatcagttgttggacatgtt
ttcagattagattttccgccagcatatcaagattggaatgccagtaatcctctggatctt
tttcaagctccagttcataaggcagaatcaaacccaaaggttcatatttgtaggcattta
aaccaagaagctcgtggttgtggtcatttggtgttatggttggattgtgatcgtgaagga
gaaaatatatgttttgaagtcattgagtgcactggctttcaagttaatgatgctagaaga
aaggttcatcgtgcaagattttcttctgttactgagaaagacattttgaaggctatgggt
aaccttgttgaacctaacagaaatgaggcactggctgtagatgctcggcaggagatagat
ttgaaagttggtgttgcatttacacgatttcaaactacctatttccagggaaaatatggg
aatcttgactccagatttatctcttatggaccttgtcaaactcctacccttgggttttgt
gtacagcgctatttgcaaattacttcttttaagccagaaaagttttggactctgcaccct
tacttagtacagaatggctatgaacttaaactagaatgggaacgtcaaaagttgtttgat
tttgatgttgctacgatgtttcagaagttggttatgcaggatggaatcttagaagtaatt
gacatatcagaaaagcaggaaagcaaagttcgtccttgtggtcttaacacagtgaatctt
ctaaaggttgcttcaagtgcattagggtatggacctcaaatggctatgcagttagctgag
cgcttgtatactcaaggattcatcagctatccacgtacagaaagcacggcatacccttct
tcatttgactttagaggcacactcagtgcactggcaaataacccagtctggggtgattat
gtagaaagactgcttgctgaaggttatgctaagccacgatcgggaactgatgcaggggac
catcctccaattactcctatgcggtcagcaactgaagatatgctaggcaaagatgcctgg
agactatactcatatgtctgtcaacattttctaggcactgtatctcctgactgcaagtat
ataaggacgaaggtaaaattttcaatgggtgctgaattcttccattgtgtagggcaacat
gttactgtccaaggatttacttacattatgccgtggttggctataaatgaaaaaaagatt
cctcagtttactaaagaagagaagattgaagtttcaaaggtggagctgcatgagggaaat
actgtaccaccagagtatcttagcgagagtgagctaattaccctaatggagaagaatgga
atagggacagatgcatcaatacctgtgcatattaacaatatatgtgaacgcaattatgtc
caggttcaagctggaagaaagttggctccaactacattaggtatcacacttataagaggc
taccagtgtattgatccggatctctgtttgccagacatccgaagtttcattgagcaacag
attactcttgttgctaaaggccaggcagatcactctggtgttgtacagcatgtgttacag
cagttcaggcagaaatatagttattttgttaaacagattgaaaacatggatgcactgttt
gaagcacaattttccccactttctaactctggacgtgttcttagtaaatgtggcaaatgc
ctgcggtatatgaagtatatttctatgcagccatcacgtctttattgttctacatgcgag
gatgtttataatcttcctcaaagaggaaccttaaagctgtacaaggaacttacatgccct
ttggacaacttcgagcttttgattttctccatggctggtccagaaggcaagtcattcccc
ctctgcccattttgctataataatccaccatttgaaggtatagatacactctatggtact
accactactggtagttttggcaaacttggaaaaggagctggcatgccatgcttcctctgc
ccacacccagcatgccggcattctatgatggcccaaggtgtctgcgcctgcccggaatgc
aatgggacactagttttagacccagtaagcgctccaaagtggagactttattgcaatatg
tgcaactgccttgtttccctccctcaaggtgctcaccgcattgcaacaactcaggaacaa
tgtcctgaatgcggttctaaaattatagaaatcgacttcaataagaaaacgacacctttg
gatgatggagctaccttgcatactggttgtattctttgtgatgaattgcttcattctctc
attgaagtgaagcatggcaagtcatttttcaaacggctgggtggcagagggagggggaga
ggagcagggagaggtgcatttaaaggaaggggacggggcactggaaaaggggtcgatcgg
aaaatgagttttcgagatttctga

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