KEGG   Citrus sinensis (Valencia orange): 102617923
Entry
102617923         CDS       T02983                                 
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102617923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102617923
Enzymes [BR:cit01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     102617923
DNA repair and recombination proteins [BR:cit03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     102617923
SSDB
Motif
Pfam: Exo_endo_phos SAP Exo_endo_phos_2 HeH
Other DBs
NCBI-GeneID: 102617923
NCBI-ProteinID: XP_006491512
LinkDB
Position
9:complement(join(10417570..10417691,10417893..10418052,10418243..10418323,10418681..10418728,10418818..10418955,10419241..10419351,10419492..10419742,10420007..10420270,10420483..10420562,10420955..10421055,10421215..10421371,10421589..10421638))
AA seq 520 aa
MNQVFQLGLKAFVTPAGFAVTPRNFRIGTFVSFRAMKPKRHLASSSKPASSFDNMEDEKV
NRLVGSTPKDIGVESDEAGIQSVKNNPERIEVMTVQELRTILRSIGVPAKGSKRDLVSAL
KVYVEKKMDVGSSHVEIEEVSSISAESVSVKRKANTKSISGERKAKKFSHEEHAQEIYSV
PEVSALQESKRRAKKSPIGDETGEVDAKASVKTDKISVTLPTVQSEPWTMLAHKKPQKGW
IAYNPRTMRPPPLAEGTKSVKLLSWNVNGLRALLKLEGFSVLQLAQRENFDVLCLQETKL
QEKDVESIKQCLLDGYENSFWTCSTSKLGYSGTAIISRIKPLSVTYGLGISDHDSEGRLV
TAEFDSFFLLSCYVPNSGDGLRRLSYRIREWDPSLSSYVKELEKKKPVILTGDLNCAHQE
IDIYNPAGNRRSAGFTDEERQSFGANFLSKGFVDTFRAQHPGVVGYTYWGYRHGGRKTNR
GWRLDYFLVSQSLADKFHDSYILPDVTGSDHSPIGLILKL
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgaatcaagtctttcaactaggactcaaagctttcgttactcctgctggctttgcagtt
actccaagaaattttagaattggaacctttgtctccttcagagctatgaagcctaaacgg
catcttgcaagttcatccaaaccggcatcgtctttcgataacatggaagatgaaaaggtg
aacagattagtgggttcgaccccaaaggatattggtgtagaaagcgacgaagctggaatt
cagagtgtaaagaataatcccgagagaattgaggtcatgacagttcaagaactcagaact
atattgaggagtattggggtccctgctaaaggttctaaacgtgatctagtatctgccttg
aaggtttatgtggagaagaagatggatgttggtagttctcatgtggaaatagaagaggta
tcctccatttctgctgaaagtgtatcagtaaaaaggaaggctaatacgaaaagtatatca
ggggagaggaaggctaagaagttttctcatgaggaacatgctcaagaaatttattctgtt
ccagaagtttctgcactccaagaaagtaagagaagggctaaaaaatcaccaattggtgat
gaaactggtgaagttgatgctaaagcctcagtcaaaactgataagatttcagttactctg
ccaacagtccaaagtgaaccttggacaatgcttgcacataagaagcctcaaaagggatgg
attgcttataaccctagaactatgaggcctccacctctggcagagggtacaaaatctgtg
aagcttctgtcttggaatgtcaatgggttaagagcgttactgaagttagaaggattctct
gtactgcaactggcccaaagggaaaattttgatgtattgtgcttgcaagaaaccaaactg
caggaaaaagatgtcgaatcaatcaaacagtgtctcctagatggatatgagaatagcttc
tggacatgtagcacttctaaacttgggtattctggtacagcaattatctcacggataaaa
ccactctcagtcacatatggcctaggcatatcagatcacgacagtgagggacggctggtg
acagcagagtttgattcattttttctgttaagctgttatgttccaaactctggagatggc
ttgagaagactgtcatacagaattagagaatgggatccatctcttagcagctatgtgaaa
gagctggaaaagaagaagcctgtcattttgactggtgatcttaattgtgctcatcaggag
atagacatttataaccctgctggaaatagaagaagtgctggcttcacagatgaagaaaga
caatcttttggcgcaaacttcttatctaaaggttttgtagataccttcagagctcaacat
cctggtgttgtaggctatacttattggggttataggcatggtgggcgcaaaaccaataga
gggtggcggcttgactacttcctagtatcacaatctctagctgataagttccatgattca
tacattcttcctgatgttaccggtagcgatcattctccaattggccttattctcaagctc
tag

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