Citrus sinensis (Valencia orange): 102618115
Help
Entry
102618115 CDS
T02983
Name
(RefSeq) SAC3 family protein C isoform X2
KO
K23719
nuclear mRNA export protein SAC3
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102618115
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
102618115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
102618115
NCBI-ProteinID:
XP_006471256
LinkDB
All DBs
Position
5:join(16015944..16016181,16016310..16016410,16016659..16016880,16017682..16017903,16017999..16018084,16018232..16018328,16018540..16018632,16018717..16018871,16019482..16019497)
Genome browser
AA seq
409 aa
AA seq
DB search
MERRHHSQSHSQRQQRRNHFSSSSSSSSNQSRSNNRFSFPKSSSSSSSSSANDVRDRRRE
TQEEKQEEAIVGTCPFMCPEAERLQRQRLRDLAVFERLHGDPRNSSPALAVKKFCRTMSA
KEVRASDVRPLPVLEETLNYLLSLLDSTEHPFEVIHDFVFDRTRSVRQDLIMQNIVNDKA
INMFEKIVKFHVISHHKLRSSCSSSSISPLHYLNLEQLTKALTSLYNLYEANRSSKPIHE
KEAEFRSFYVLLHLDSNGQPVGESLSLWFRHVPSPIIKSKEMWFARQALRYFQMGNYRRF
LSTVAAEASYLQYCIIEPYIDEVRSLALCCIHNCCYKLHPYPLGHLSKVLMMEESDVELF
CNAYGLQTCIDEVGNKLLPTKQTTFCRPKGGLQNYSFLGFQQLGRQIEL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagagaagacatcattctcaatctcattctcaacgacaacaacgaagaaatcatttt
tcttcatcatcatcatcatcatctaatcaaagcaggagcaacaacaggttctcgtttccc
aagtcaagctcaagctcaagctcaagctcagccaatgatgtccgcgacagaagaagagaa
acccaagaagaaaaacaagaagaagctattgttggaacttgcccatttatgtgcccagag
gcggagaggctccagcgccagcgccttcgtgatttagctgtctttgagagacttcatgga
gatcctcgcaattcatctccagcccttgctgttaaaaagttttgcaggacgatgtcggcc
aaggaagtgcgggcatcagatgtgcggcctctcccagtactggaagaaactctaaactac
cttttaagcttgctggattctacggaacatccttttgaagtgattcatgattttgtcttt
gataggacgaggtccgtgaggcaagaccttatcatgcagaatattgtcaatgacaaagca
atcaacatgttcgaaaagatagtcaaatttcatgtcatatctcaccacaagcttcgaagt
agctgtagcagttcgagcatttctcccttgcactacctcaacttggagcagcttacaaaa
gctctgacatctctttataatctgtatgaagctaatcggagctccaaacctattcatgag
aaggaagctgaatttcgttcattttatgtgcttcttcaccttgattctaatggtcaacca
gtgggggagtcgctttctctctggtttcgtcacgtgccttctcctatcatcaagtcaaaa
gaaatgtggtttgctcgccaggccttacggtactttcagatgggcaattataggcgtttt
ttatcgactgttgctgctgaggcatcatatctacagtactgcattattgaaccttatatt
gatgaggttcgatcacttgctttgtgctgtatacataattgttgttataagctccatccc
tatcctttagggcacttatctaaagtcttgatgatggaggaatcggacgtggaattattt
tgcaatgcatatggtcttcagacatgcatagatgaagtaggaaataaattgctacccacc
aagcaaacaactttttgtcgtcccaagggtggacttcaaaattacagctttttgggattc
cagcaacttgggaggcaaattgaactttga
DBGET
integrated database retrieval system
