Citrus sinensis (Valencia orange): 102618118
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Entry
102618118 CDS
T02983
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102618118
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102618118
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
102618118
NCBI-ProteinID:
XP_006493141
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All DBs
Position
3:complement(join(33478930..33479154,33479257..33479485,33479586..33479875,33480007..33480456))
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AA seq
397 aa
AA seq
DB search
MSTSMSLPIKFLPFLLILFFSSSLAIPLSYNVLSFGARPDGQTDSVKSFLAAWAQACGSA
EAATIYVPPGRYLLSNVVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVSGV
SINGGVLDGQGAGLWACKKSDNSNCPSGATTLRFSNSDNVVINGLASVDSQMFHIVINGC
NDVKVQGVKVSAAGESPNTDGIHVQSSSGVTILDSKIGTGDDCVSVGPGATNLWIENVAC
GPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSGGFARNILFQHALM
NNVDNPIIIDQNYCPDNGNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGI
SLEDVKLIYKNQPAEASCTNADGSASGFVLPNSCLKT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcaatgtctttgcctattaaatttttaccatttcttttgattctcttcttt
agttcatctttagcaattcctttgagttacaatgtgctgagcttcggagccagacccgat
ggccagactgactcagtaaaatcctttcttgctgcatgggctcaagcctgtggctcggcc
gaggccgcaaccatttacgtaccaccggggaggtacttactaagcaatgttgtgtttcaa
ggccaatgcaagaacaatgatattaccatacgtattgacgggactctggtggctccagct
gattatcatgttatcggaaatgccgaaaactggattttatttgagcatgttagtggggtt
tctattaatggtggcgttcttgatggccaaggtgctggtttgtgggcttgtaaaaagtcg
gacaatagtaattgccctagtggcgctacgacacttcgctttagcaactcagacaacgtt
gtgattaacggattagcatccgtagatagccagatgttccatattgtcatcaatggatgc
aacgatgtgaaagtacagggggtcaaagtttcggccgccggtgagagcccaaacaccgat
ggcattcacgttcaatcatcaagtggtgtcacaattttggacagcaaaattgggactggt
gatgactgtgtatcagttgggcctggcgccaccaacttatggattgaaaatgttgcttgt
ggccctggccatgggatcagcattggcagcttaggcaaagagcaacaagaggctggagtg
caaaatgtgacagtaacatctgtgacatttacaggcactcaaaatggagtgaggattaag
tcctggggcagaacaagcggtggatttgccaggaacattcttttccaacatgctcttatg
aacaatgtcgataatccaatcataattgatcaaaattactgccctgacaacgggaattgt
cctggacaggcttccggggttaaaatcagtgatgtgatatatcaagatattcatggaaca
tcggcaacggaagttggagtaaagctcgattgcagttcaaagaatccatgcactggaatt
agcttggaggatgtgaagctcatttacaagaatcaaccagctgaagcttcctgtaccaac
gctgatggatcggcctctggatttgttcttccaaatagttgcttgaagacttga
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