Citrus sinensis (Valencia orange): 102618370
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Entry
102618370 CDS
T02983
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102618370
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cit01009
]
102618370
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102618370
Protein phosphatases and associated proteins [BR:
cit01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102618370
Spliceosome [BR:
cit03041
]
Common components
Common spliceosomal components
SR proteins
102618370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
102618370
NCBI-ProteinID:
XP_024957182
LinkDB
All DBs
Position
7:complement(join(657380..657588,657704..657773,658365..658514,658633..658732,658860..658883,658990..659130,660064..660083,660185..660187))
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AA seq
238 aa
AA seq
DB search
MADSPRKKDLRSPSPVRELSRSRSRSRSFSRSRSRSRSGSWSRPRQRSRSQSRGRSRSRS
RGRTETGNPGNTLYVTGLSTRVTERDLEKHFSKEGKVASCFLVVEPRTRISRGFAFVTMD
SVEDAERCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDIGRGDRGRYRSG
RDDYGYRRSPRRSPYRGGRDYSPRHSPPYGGRSRRERSRSVPRSPYGSPERKYARGSR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcctcgcaaaaaggatttgcggtccccttcccctgtgagggaactttca
aggtctagatctagatctaggtctttctctaggtcgaggtctcgatcaagatcaggatct
tggtctaggccaaggcagagatcccgttcccaaagtcgcggcagatcaaggtccagaagt
cgtggaaggaccgagactggaaatcctggaaataccctttatgtaactggcctatctaca
agagtcacagaaagggaccttgaaaaacatttctccaaggaggggaaggttgcttcatgt
tttcttgttgtggagccccgtacacgcatctctcgaggttttgcttttgttactatggat
agtgttgaggatgctgaacgctgcatcaagtatctcaaccagtcagttctggagggccga
tatattactgtggagaggtcacggaggaaacgaccaagaacccctactcctggacactat
cttgggctgaaaagttcaagagacattggccgtggtgatcgcggaaggtatcgttccggc
cgtgatgattatggttatcgtagatctccaagacgctctccataccgaggaggtcgtgat
tattctcctaggcattctcctccttatggtggaagatcaaggagggagcggtccaggtca
gttccccgctcaccttatggtagcccagaaaggaagtatgctcgtggttctagatga
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