Citrus sinensis (Valencia orange): 102618530
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Entry
102618530 CDS
T02983
Name
(RefSeq) YTH domain-containing protein ECT1
KO
K20102
YTH domain-containing family protein
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102618530
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102618530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
102618530
NCBI-ProteinID:
XP_006479102
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All DBs
Position
3:complement(join(40633053..40633307,40633530..40633676,40633768..40633980,40634078..40634659,40634817..40635350,40636338..40636414,40637759..40637786))
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AA seq
611 aa
AA seq
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MATVASSSDQAADILQNLSLDSETNAVAGHEYANKGLGDNGSVMYSQNYGYTPYGIYPST
GDVQLQGLQQYHYPSPYYQLDQGSAPQGGGSTSVIADKVSLSVESNKDNPMANGPGVSGN
GRSKLQRPNYQYPYLDPNSSHGRGGLSTVVPSPSYQDPGYSFDGIHSPITWLDTSIFGGG
QSKHNVNAGYTSPISHSNNFPSGRNQNHRPHLANFHHTRPTSDAFGYMSQMYANNPMYGH
YGNTFRAGPGYGSFGYDSWISGRGWYPVDSKYKPRGRGYGASGSGKENVDGLNELNKGPR
AKGFKNQEGFDPVTVAAKGQNLKSSESTPEDNLPLIPDKEKYGGEDFPESYSDAKFFIIK
SYSEDDVHKSVKYNMWTSTPNGNKKLDAAYREAKEKSSDCPVFLLFSVNASGQFVGVAEM
VGPVDFDKTVEYWQQDKWVGCFPLKWHIIKDVPNSSLRHITLENNENKPVTNSRDTQEVN
FEIGIQILKIFKSHSSKRCILDDFGFYEARERIMQQKKAKQHQLQRQVSDGKPSDVIIDD
KDKDVALAKDRVQKSQEETLVKELALTETIGDVKKLEENGSAATVEDAVKGAKSAVSSGK
KGTSNGVASAC
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgttgcttcttcctctgatcaagctgctgatatactgcagaatttgtcattg
gattctgagaccaatgcagttgcaggtcatgagtatgcaaacaagggccttggtgataat
ggatctgtcatgtactcccaaaactatggttatacaccatatggaatatatccttctact
ggtgatgttcaactgcaagggctacaacaataccattatccaagtccttattaccagctt
gaccaaggcagtgctcctcaaggtgggggttcaacttctgtcatagcagacaaagtgtct
ttgtctgttgaatcaaataaagacaaccccatggctaatggtcctggtgtgagtggaaat
ggtaggtcgaagctgcaaagaccaaattatcagtacccatatttagacccaaacagttct
catggaagaggaggcttgtcaacagtggttccttctcctagttatcaagatcctggatat
agttttgatggtattcattcaccaattacttggttagatacctcaatatttggtggtggg
cagtccaaacataatgtaaatgcaggatatacttcaccgatatcgcattccaataatttt
ccatctgggaggaatcagaatcatcgtccccatcttgcgaattttcaccacacaagaccc
acaagcgacgcttttggttatatgagtcagatgtatgcaaacaacccaatgtatggccac
tatggaaacacatttcgagctggtcctggctatggatcatttggttatgattcctggata
agtgggcgtggatggtatcctgttgatagtaagtacaaacccaggggtcgtggctatggt
gcttctggctctggcaaggaaaatgtggatggcttgaatgagctgaataaaggaccaagg
gccaagggtttcaaaaaccaagaggggtttgatcctgtcactgtagcagctaaaggacag
aaccttaaatctagtgagagcactcctgaggataatctacctcttattccagataaggag
aagtacggcggcgaagattttcccgagagttactcagatgcaaagtttttcatcataaaa
tcctacagtgaggatgatgttcataaaagtgttaaatataatatgtggaccagcacgcct
aatggcaataagaagcttgatgctgcatatcgtgaagccaaggagaagtccagcgactgt
cctgtatttctgttattttctgtcaatgccagtgggcaatttgttggtgtagcagagatg
gttggccctgttgactttgacaaaactgtggaatactggcaacaggacaagtgggttggc
tgctttcctttaaagtggcatattattaaggatgtaccaaatagttcattgaggcatata
acacttgaaaacaatgaaaacaagcccgtcactaatagtagggatacccaggaggttaat
tttgagataggcattcagattctaaaaatttttaagagtcattcaagcaagagatgcatc
ctagatgattttgggttttatgaggctcgtgagaggataatgcagcaaaagaaggcgaag
caacaccagttacagagacaggtatcggatgggaagcctagtgacgttataattgatgat
aaagacaaagacgtggctttagcaaaagatagagtgcaaaaatcgcaagaagaaactttg
gtaaaggaactagcactgactgagacaattggagatgtgaagaagttggaggagaatgga
tcagctgcaacagtagaagatgctgtaaaaggtgccaaatcagctgtatcgtctgggaag
aagggtacttctaatggggttgcaagcgcatgctaa
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