Citrus sinensis (Valencia orange): 102618561
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Entry
102618561 CDS
T02983
Name
(RefSeq) protein XAP5 CIRCADIAN TIMEKEEPER
KO
K13119
protein FAM50
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102618561
Spliceosome [BR:
cit03041
]
Complex C
Other components
Complex C specific factors
102618561
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Gene cluster
GFIT
Motif
Pfam:
XAP5
Mutator
Motif
Other DBs
NCBI-GeneID:
102618561
NCBI-ProteinID:
XP_006487408
LinkDB
All DBs
Position
8:join(8024056..8024226,8024358..8024423,8024526..8024590,8024681..8024793,8025922..8026000,8026097..8026173,8026261..8026322,8026405..8026536,8026639..8026692,8027337..8027402,8027497..8027571,8027669..8027719)
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AA seq
336 aa
AA seq
DB search
MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKTKSVSDKGQPGLLQFGSSTSEILE
TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLLQEEEELQLEKRKKRKIKGNSR
LSFADDFESENEEENGEIENLKTKRLAQAKLGKDPTVETSFLPDSEREAEEQSERERLQR
QWLREQEQIRNEPLQITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTTS
VENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGK
VVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtatgggagatgggtacgtgggcacggcccaagacgcggtgaggatccggaga
ctcgagaagcaaagagaagccgagcgtcgcaaaatccaagagctcaaaacgaagtccgtc
tccgacaagggccagcccggtctcctccagtttggttcaagtacctccgagattctagaa
actgcgtttaagaaggaaaccgtaggtttagtcaccagagaggaatacgttgagaagagg
gttaatattcggaacaagattgaagaggaagaaaaggagaagcttcagaagctactacaa
gaggaagaggagctgcaattggaaaagcgtaaaaagcgaaagattaagggaaattctcga
ttatcatttgctgatgattttgagagtgaaaatgaagaggagaatggagaaattgaaaat
ttgaaaacaaagaggcttgcgcaagcgaaattgggaaaagatccaacggtggagactagc
tttttgcctgacagtgagagagaggcagaggagcaatctgagcgtgaacggttgcagcga
cagtggcttcgtgagcaggagcaaattcgaaatgagccccttcaaatcacttatagttat
tgggatggagcaggccatagacgagttatccaggttcggaagggtgatacaataggagag
tttcttcgggctgttcaacaacaacttgcacctgagtttcgagaaatccgaacgacgtca
gtggaaaatttgctttatgttaaagaagatcttatcatccctcatcaacacagtttttat
gagcttattgttaacaaagccaggggaaaaagtggaccgctttttcactttgatgttcac
gaggatgtacggacgattgctgatgcaactatagaaaaagatgagtcccatgctgggaaa
gttgtggagaggcactggtatgagaagaacaagcatatcttccctgcttctcgatgggag
atttatgacccaacgaagaaatgggagcgatacaccatccatggggattga
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