KEGG   Citrus sinensis (Valencia orange): 102619228
Entry
102619228         CDS       T02983                                 
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
  KO
K08991  crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03440  Homologous recombination
cit03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102619228
   03460 Fanconi anemia pathway
    102619228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102619228
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     102619228
SSDB
Motif
Pfam: ERCC4 WHD_MUS81 EME1-MUS81_C HHH_8
Other DBs
NCBI-GeneID: 102619228
NCBI-ProteinID: XP_006482972
LinkDB
Position
4:complement(join(28752178..28752282,28752438..28752524,28752726..28752963,28753616..28753695,28753944..28754102,28754751..28754808,28754906..28755054,28755510..28755634,28755717..28755921,28756353..28756584,28756788..28756913,28757015..28757101,28757193..28757286,28757370..28757458,28757547..28757761))
AA seq 682 aa
MIEIEMENHSKRLVVSPENEELAMYMLQKRQEMAETPKGLSENIDMTLSKAYNNICDAKN
PIKTLKDLSQVKGVGKWILKLMQEFFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQR
NSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPRQFGSSPRDW
YSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGKDSDKN
ERSELDLVLTHPDSNGEVTECFVPLSRKEKSTDVPFESLERFTRMGYSKEQVLQAFGEVS
ETSQHKEISSLWPAVLCRLREDEVYALHLELHSVREDYNAASRTCISTNGRVDLEGSWSN
QKGSGSGGENVPHFSNGSTPSLFTLKACSSSDYDAKWSRSDDLKTRVNLLSVPPLSFGER
FEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQS
EYVLDFIVERKKVDDLRSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAAESIKTA
CFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQLKCAAVCPPFDEFLKR
CQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCAQEEMLW
KQSNNAVSASASRNIFQLVWGK
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgattgaaatcgaaatggagaatcacagcaagaggcttgttgtgtctccggagaacgag
gaattggcaatgtacatgttgcagaagaggcaagaaatggcggagacgccgaaaggttta
tcggagaacatcgacatgactctgtccaaggcttataacaacatttgcgatgcaaagaat
ccaatcaagactctgaaagatttgtctcaagtcaagggtgtggggaagtggattctcaag
ttaatgcaagagttctttgagaccgattctggtggttctgaacccgaagacttgaccgcc
aaaagtaagaaaagcaaagcagtgaaaactaaaggaaccaaacggtatatgccacaaagg
aattctgtggcatatgcactgttgattactttgtacaggggaactacaaatgggaatgaa
tttatgcgtaaacaggaccttattgatgcagctgaagcaagtggcctttctcacacgcca
attatgccagagaaaggaaaaggtaaacctcgtcaatttggaagttctccaagggactgg
tatagtggttggagctgcatgaaaactttgataactaaaggattagttgtgaaatcaagt
tgcccagccaagtacatgctgactccgggagggcgagaagcagcacgggaatgccttagc
agatctggttttgcagattctatcgagaacgtggtcaatggaaaggattctgataagaac
gaacgcagtgaactggatttggtgctcactcatcctgattcaaatggagaagtgacagag
tgttttgtgcctttgagtaggaaggagaaatcaactgatgttccttttgaatctcttgaa
aggttcacgcggatgggatattccaaggaacaggttcttcaggcgtttggtgaagtttca
gaaacctcccaacacaaggagatctcgtctctctggcctgctgttttatgtcgtcttcga
gaagacgaagtctatgctctgcacttagagctgcacagtgtaagagaggattacaatgca
gcatcaagaacttgcatttctacaaatggtcgagtagatcttgaaggaagttggagtaat
cagaagggttctggttctggtggtgagaatgtgccgcacttctctaatggctccacacca
agcttgtttaccttgaaagcttgctcatcatctgattatgatgcaaaatggtcaaggtca
gatgatctgaaaacaagagtgaatcttttaagtgtaccacctctaagctttggggagaga
tttgaggatgcatatgaggtagtcttaatattagatgatcgggagcaatttgctgttcaa
gggtcccgttccaggagaattattgaaaatgtctgctctcagttcaagatccaaatggag
gttcggcgtttaccagtaggtgatggaatctggatagcccgccacagacaaactcagagt
gaatatgttctagattttattgtcgagaggaagaaagttgatgatttacgctcttcaatc
agggacaatcgctatagggatcaaaaactcaggcttgtgagatgcggacttaaaaagctg
atatatcttgtggaaggtgacccaaattcttctgaagctgctgagagtatcaaaacagct
tgttttacgacagagattctggagggatttgatgtacagagaactagtggtttagccgat
acattgaggaagtacggttatattactcaagcgataactgaatattataaagtagagctg
cctgaggaccagcttaaatgcgctgcagtctgtcctcctttcgatgaatttctcaaaagg
tgccaagatctggataaaatgaccgtcagtgatgtatttgcagttcagcttatgcaggtg
ccacaggtaacagaggagattgccattactgttttggatttgtaccctacacttctatct
cttgctcatgcttactccattcttgaaggtgatgtttgcgcgcaagaggagatgctttgg
aagcagagtaacaatgcagtcagtgcaagtgctagtagaaatattttccaactagtttgg
ggcaagtga

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