Citrus sinensis (Valencia orange): 102619334
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Entry
102619334 CDS
T02983
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102619334
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cit01009
]
102619334
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102619334
03036 Chromosome and associated proteins [BR:
cit03036
]
102619334
Protein phosphatases and associated proteins [BR:
cit01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
102619334
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
102619334
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
102619334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF6279
Motif
Other DBs
NCBI-GeneID:
102619334
NCBI-ProteinID:
XP_006486703
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All DBs
Position
8:complement(join(852727..853074,853175..854482))
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AA seq
551 aa
AA seq
DB search
MASTEVRRKNKEDLLVITLSFYLSHFYMTWEEKFHRSSISDITTLFVYKTPLSFWPFFHD
PQEIKIKQNTETLSLFFIIHRTKKMGGVRGSPVASSKKKSSTLQYLFDLDSRANSGSNHS
SPNNNGLQSPYDSEKEEILSAISICNTIFTFTDPSESPEQQDLKRFKLLQLLSITKSPKK
QLDDYILSHLISMISANLFRPLPPPISTPITGDLPEDEELFSSPQPLWPHLQIVYDILLR
LVLHVDPKTLRDYIDHRFLTNLLSLFQSEDLRERDSLKNIYHRIYAKFTFYRSFMRKAMN
DVFLQYNFETEKHCGIGELLEIWGSIINGFTVPLKEEHKLFLIRVLIPLHKSKGMQAYHR
QLAYCVSQFVQKEPALGGLVARGILKYWPVTNCRKEVLLIGELEELVDSIDPAQYRRLAL
PLCTKITKCLNSCNSEVAERALYVWNNEQFVRMVSSSLEDVFPVIVEGMEKNLKLHWSKS
VKQLTENVKVMLEQMDPNLYSKCLEATEIRESAARQEEMKRKEKWRRIETLAAAKKQNQF
LQPQQYIRVPH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccgaggtaaggagaaagaacaaagaagatctcttagttataacattgtca
ttttacttgtcacatttctatatgacttgggaggagaaatttcataggagctcaatatcg
gatattacaacacttttcgtctataaaacaccgctgtccttttggcctttctttcatgac
ccacaagaaataaagataaaacaaaacacagaaacactctctctttttttcatcattcat
agaacaaagaaaatgggtggcgtcagaggctctcctgtagcctcttcaaagaagaaatca
tctactcttcagtacttgtttgatctagattccagggctaactctggcagcaatcactcc
agtcctaataacaatggcttgcaatctccttatgattccgaaaaagaggaaatcctttct
gcaatctctatctgcaacactattttcacattcactgatccttcagagtcccctgaacag
caagacctcaagcggttcaagcttttgcagctgctttccatcacaaagtcaccgaaaaaa
caactggacgattatattctatcgcatctcatttccatgatatcagcaaatctcttccgg
ccactgcctcctccgataagtacccccatcactggggatttacctgaggatgaagaactc
ttttccagtcctcaacctttatggccacacctgcagattgtttatgatattctccttaga
cttgtcctccacgtggatcccaagacacttcgtgattatattgatcatcgtttcctgacc
aatctcctctccctgtttcaatccgaagacctgagagaacgtgacagcttgaagaatata
tatcaccggatatatgccaagttcaccttttaccgatcattcatgaggaaagcaatgaac
gatgtgttcttgcagtataatttcgagacagagaagcactgtggcatcggtgagctactt
gagatatggggaagtatcattaatggtttcacagttccactcaaggaagagcacaagctc
ttcctaataagagtgctgattcccttgcacaagtctaagggaatgcaggcttatcacagg
cagctggcttattgtgtttctcagtttgtgcagaaagagcctgcactcggtgggcttgtt
gctagagggattctaaagtattggccggtcaccaactgccggaaggaggttttgcttatt
ggagaacttgaagaactggttgacagcatagacccggctcagtataggaggctagctctg
cctttatgcaccaaaataacaaaatgcttgaacagttgcaactcagaggttgctgagaga
gcactgtatgtatggaacaatgagcagtttgtgagaatggtatcatcctcgctggaagat
gtattcccagtgatagttgaaggcatggagaagaacctaaagttgcactggagcaagagt
gtgaagcaactaacagaaaatgtcaaagtaatgctggaacaaatggatccaaatttatac
tccaaatgcctggaagccactgaaatcagagaatccgcagctcgacaagaagagatgaag
aggaaagagaaatggagacgaattgaaacattggctgcagcaaagaaacagaatcagttc
cttcaaccgcagcaatatatacgtgttcctcattga
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integrated database retrieval system
