Citrus sinensis (Valencia orange): 102619789
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Entry
102619789 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102619789
KO
K11097
small nuclear ribonucleoprotein E
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102619789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102619789
03041 Spliceosome [BR:
cit03041
]
102619789
03032 DNA replication proteins [BR:
cit03032
]
102619789
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
102619789
Spliceosome [BR:
cit03041
]
Complex A
U1 snRNP components
Sm proteins
102619789
U2 snRNP components
102619789
Complex B
U1 snRNP components
102619789
U4/U6.U5 tri-snRNP components
102619789
Complex C
U2 snRNP components
102619789
DNA replication proteins [BR:
cit03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
102619789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
102619789
NCBI-ProteinID:
XP_006474134
LinkDB
All DBs
Position
9:complement(join(32652571..32652580,32652660..32652705,32652785..32652863,32654998..32655060,32655176..32655202,32655321..32655362))
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AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
HIKKNTRKPLGRILLKGDNITLMMNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccaaagttcagaggattatgactcagcccattaatttgattttcaggttc
cttcaaagcaaagctcgcattcagatttggctttttgagcagaaggatttgaggattgaa
ggccgaattattggttttgatgagtacatgaacttggttttggatgatgctgaagaggtt
cacataaagaaaaataccagaaagccattaggaaggattcttctcaaaggagacaacata
actcttatgatgaacacggggaagtga
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integrated database retrieval system
