Citrus sinensis (Valencia orange): 102619856
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Entry
102619856 CDS
T02983
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102619856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cit03400
]
102619856
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
102619856
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102619856
Prokaryotic type
102619856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
102619856
NCBI-ProteinID:
XP_006470907
LinkDB
All DBs
Position
8:complement(join(19915347..19915413,19916253..19916336,19916855..19916990,19921918..19921948,19922732..19922890,19924076..19924299,19924634..19924916))
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AA seq
327 aa
AA seq
DB search
MGSSKTIMDLFQPAAKRFKLSSPHCCASDNTPNSKPLLQVVSRKLPLSSKSSGSSSAITT
SLTAEQQSRIEFNRYVAKSKRNLKACSQKVSKAKEEGSGYVKLEELLAEETWLEVLHGEL
QKPYAKRLCEFVEKEIKDSGVDIFPPQHLIFNALNTTPFDRVKAVIIGQDPYHGPGQAMG
LSFSVPEGVKIPSSLANIFKEIHQDVGCRLPSHGNLEKWAVQGVLLLNTVLTVRRHQANS
HAKKGWEQFTDAVIKAISDKKEGVVFLLWGNSAQEKSRLINVTKHHILKAAHPSGLSANR
GFFGCRHFSRTNQILEQMGMNPIDWQL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttcaaaaacgataatggatctctttcaacccgctgccaagcgcttcaaactc
tccagtccccactgctgcgcctctgataatacccctaattctaaacccttgcttcaagtc
gtttcccgaaaacttcctttgagctccaaatcatcggggagtagctccgccatcaccacc
tccctcaccgccgagcaacaatcccgcatcgaattcaacagatatgtcgcgaaatccaaa
cgaaatctcaaagcctgctcccaaaaagtgtccaaagctaaggaagaaggttcgggatat
gtgaaattggaggagctgttggcggaggagacgtggttggaggtgcttcatggagaactg
caaaagccttatgctaaaagattgtgtgaatttgttgaaaaagagataaaggatagtggt
gtcgacatttttccgccgcagcacttgatatttaatgctcttaacactaccccttttgac
agagtcaaggctgtcataattggacaggacccttatcatggacctggtcaagcaatgggt
ctttcattttctgtgccagaaggagtgaagatcccttcaagtttggcaaatatattcaag
gaaattcatcaagatgttggctgtcgacttccatctcatggaaacctagagaagtgggct
gttcagggtgttttgctgctcaacactgtgcttacagttaggaggcatcaagctaattct
cacgcaaagaaaggatgggaacaatttactgatgccgttatcaaagcaatttcagataag
aaggaaggagttgtttttctcctttggggaaactcagctcaagaaaaatccaggttgatc
aatgtgacaaagcatcacattcttaaagcagcacatccttctggtttgtctgcaaataga
ggcttctttggctgcaggcatttttcacgaacaaaccagattttggagcaaatgggaatg
aacccgatcgattggcaactttga
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