KEGG   Citrus sinensis (Valencia orange): 102619964
Entry
102619964         CDS       T02983                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X2
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102619964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102619964
   03036 Chromosome and associated proteins [BR:cit03036]
    102619964
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102619964
   Coactivators
    SAGA/TFTC/STAGA complex
     102619964
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     102619964
SSDB
Motif
Pfam: TAF4 RST SPMIP10-like
Other DBs
NCBI-GeneID: 102619964
NCBI-ProteinID: XP_006472283
LinkDB
Position
5:complement(join(30130811..30130983,30131719..30131977,30132062..30132127,30132280..30132420,30132497..30132553,30132625..30132680,30132787..30132922,30133035..30133122,30133236..30133360,30133856..30134815,30134917..30135012,30135357..30135919,30136586..30136691,30136789..30136827))
AA seq 954 aa
MDPSIMKLLEEDEDESMHSGADVDAFQAALNRDIGGDVSTSQPSDSESALVQGNDSSNTL
SQPMAQWQNASQDENTNFHSQQGPESARLQEQHLQQMELKQHGSVAENQQQQQNESSVSE
EDNRNPLQQKQSQDDRQQGQAEEKTLSQISQTTGIQISEKNPVAMHVPERTQNQVGGPQY
PKMQKMSNQQAVGAEQPGNPMNRGKQVPFALLLPALVPHLDKDRAMQLHTLYGKLKKNEI
VKDVFVRHMRDIVGDQMLRLAVNKMQSQMGSHQFPSQSQASARQQQLRMPSASAAASQFS
DTHSFAQVNQKSNSPTDPIHGPASSAHVQVGSSYPIKENSAQKSRELEHQSASHGIHGSQ
ISSSTPSTVNQERERSSVVQGLNKQQQQHLHFPQTSFSMYGSGSNSYHPYSGTNVNNPGS
SLKPQPHDSAMRQITHHQSMGSTPLGGASQPMNVMNVPKFEKQNNMNDPGKVQGGSISQF
TSNSTLQQSSVPWQASANKEQSSGSLPSMAYVKPEPIDQGTDQPYKLHSSTPQGFSVAQV
EPGSTVPGTLKDEASEKQSPRMGFSASTSIVPSNSVSPSTTTLLDSNALSSRMPAVTSPA
GVNARTPPKKPSVSQKKPVEPPGSSPPMPSKKQKVSGAFSDQSIEQLNDVTAVSGVNLRE
EEEQLFSGTKEDSRVSEASRRVVQEEEERLILQKNPLQKKLAEIMVKCGLKNMSNDVERC
LSLCVEERMRGLLCNLIRLSKQRVDAEKIRHRTVITSDIRQQIMLMNRKAKEEWEKKQAE
AEKLRKVNEPDGDSGIDGEKEKDDGRIKSVKVNKEEDDKMRTTAANVAARAAVGGDDMFS
KWQLMAEQARQKREGGTDMASGSQAGKDTNRRPLTSGRNTKDNQDAEKRGQTTPSASGSG
RKFGKTQATVSQTKVARAITVKDVIAVLEREPQMSKSTLIYRLYEKVSSDASAE
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggacccttccataatgaagctcctcgaagaagacgaggacgagtctatgcattccggt
gctgacgtggatgcctttcaggctgctttaaatcgggatataggcggcgatgtgtccact
tctcagccatctgattcggagtccgcattggttcaaggaaacgacagcagtaataccttg
agtcagccaatggctcagtggcaaaatgctagtcaggatgaaaacacaaactttcatagt
caacaaggtccagaaagtgcacggctgcaagagcaacatttgcaacagatggagctaaag
caacatggatctgtcgctgagaatcagcagcaacagcagaatgagagttcagtctctgag
gaagacaatcgcaatcctttgcaacagaaacaatcccaagatgatcgccagcaagggcag
gccgaagaaaaaacacttagccagatttctcaaaccactggaatccagatttctgaaaag
aatcctgttgcaatgcatgtgccagagagaacacaaaatcaagttggtggacctcaatat
ccaaaaatgcaaaagatgagtaatcaacaggcagtaggtgcagagcagcctggtaaccct
atgaatcgtggtaaacaagtaccatttgccttgttgcttcctgccttggtaccacatcta
gataaggatagagccatgcagctccacacactatatggtaaactgaagaaaaacgaaatt
gttaaagatgtctttgtccgacacatgagggatattgttggtgaccagatgcttagattg
gcagtcaataaaatgcaatcacagatgggttcccatcagttcccctcacagtcccaagcc
tcagcacggcaacaacagttaaggatgccatctgctagtgctgctgcctcgcagtttagt
gatacccactcatttgcacaggttaatcagaagagcaactccccaacagatccaattcat
ggtcctgcttcatcagcccatgtgcaggttggttcaagctatccaattaaagaaaacagt
gctcaaaaatctcgagagctggagcaccaatcagcttctcatggaatacatggtagccaa
atatcttcttccactccgagcactgtcaatcaagaaagagagcgctcttcggttgtacaa
ggactgaacaagcagcaacaacagcatttgcactttccacaaacttccttttccatgtat
ggcagtggcagcaatagttatcatccgtactctgggacaaatgtgaataatccaggatca
tctctgaaaccacaacctcatgattcagcaatgaggcaaattacgcatcatcaaagtatg
ggatcaacacctttaggaggggcgagccaacccatgaatgtaatgaatgtgccaaagttt
gagaagcaaaataatatgaatgatccaggaaaagtgcagggtggttcaatttctcagttt
acaagcaattcaacattgcaacagagttctgttccttggcaagcttctgcaaataaagag
cagagttctggatctttgccatcaatggcatatgtaaagccagaaccaattgatcaggga
actgatcaaccgtacaaattgcattcctctaccccacaaggattttctgttgcacaggtt
gaaccaggcagtacagtaccaggaactttgaaggatgaagcttctgagaagcagtctcct
agaatgggtttttctgcatctactagtattgtgccctcaaattcagtttctccttcgaca
acaacactgctggattctaatgcattaagctctcggatgcctgctgtgacatctccagct
ggggttaatgcaaggacacctccaaaaaagccgtctgttagtcagaagaaaccagttgaa
cctcctggttcctcgccacccatgccaagtaagaagcaaaaagtatctggggccttttca
gatcaaagtattgaacaacttaatgatgttactgctgtcagtggagttaatctcagggaa
gaagaagaacaactgttttctgggaccaaggaggacagtcgagtatcagaagcatctcga
agggttgtgcaagaagaagaagaaaggcttattttacagaaaaatcccttgcagaaaaaa
ttggctgagatcatggtgaaatgtggcttgaagaatatgagcaatgatgtggagagatgc
ttgtccttgtgtgtcgaggagaggatgcgaggactcttatgtaatctaatcagattgtca
aagcagcgggttgatgcagagaaaattagacatcggaccgttattacctcagatattcgg
caacaaattatgcttatgaaccggaaagctaaagaagaatgggagaagaagcaggctgag
gctgaaaaactccgaaaagttaatgaacctgatggtgatagtggaattgatggtgagaag
gagaaagatgatggtcgtataaaatcagtgaaggtaaacaaagaggaggatgacaaaatg
agaacgacagctgcaaatgttgctgctcgcgctgctgttgggggagatgacatgttttcg
aaatggcaacttatggctgagcaagcccggcagaaacgtgagggaggaacggatatggca
tctggttctcaggcaggaaaagacaccaaccgcagacctctaacatctggacggaataca
aaggataatcaagatgcggagaaaagaggccaaaccactcctagtgcttctggttctggt
agaaaatttggaaagacccaagctacggtgtctcaaaccaaggtggctcgtgctattact
gttaaggatgtgattgccgtcctagaaagggaaccccagatgtccaagtcaactttgatt
taccgcttgtatgagaaagtcagttccgatgcttcagctgaataa

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