| Entry |
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| Name |
(RefSeq) nuclear pore complex protein NUP98A isoform X1
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| KO |
| K14297 | nuclear pore complex protein Nup98-Nup96 |
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| Organism |
cit Citrus sinensis (Valencia orange)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cit00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102620159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cit03019]
102620159
03036 Chromosome and associated proteins [BR:cit03036]
102620159
Messenger RNA biogenesis [BR:cit03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102620159
Chromosome and associated proteins [BR:cit03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102620159
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:complement(join(147124..147821,148218..148395,148479..148595,148673..148808,149113..149173,149283..149370,150214..150833,150933..151160,151353..151961,152875..153174,153531..153549))
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| AA seq |
1017 aa
MFGSTNPFGQSSSSPFGSQSIFGQNNNASNNPFAPKPFGTTTPFGSTGSSIFGGTSTGVF
GAPQSSSPFSSATTFGASSSPAFGSSMPAFGASSTPSFGSSSSSFGGSSIFGQKPAFGFG
STSTQTSPFGSTTQQSQPAFGSSLFGSSTPFGASSQPAFGATSTPAFGTSNPAFGATSTP
AFGATSAPAFGATSTPAFGSTGTAFGASSAPAFGSGGAFGASSTPLFGSSSTSAFGASST
PAFGASSAPAFGASSAPAFGASSTPAFGASSAGSFSFGSSPAFGQSTSAFSSSPFGTSTS
PFGAQSSPFGGQSTTPTFGSTGFGQSTFGGQRGGSRIAAYAPTTEAETGSASQPAGKLES
ISSMPVYKDKSHEELRWEDYQLGDKGGPLPAGQSAGGIGFGASAAPSSPFAPSPAFGQSS
ASPFSSSTMSNLFAPKTSTFTSSSFGTSTSTSAFGSSPFGVSSSANPFGSTSSATPSIFG
STSTPTFGTSSSPAFGSSPSLFSSTAPQGTVSSFGSGMNFGSQSSPLFSSAATGQTGSAF
GQATSSFGQSTMPSFGQSNLFSTPSPGFSGGIFSSTPSLVPSSTPSGFGQTTPSVSMPFQ
LAQPAQTAGAFGFSNFGQTQAGNTSNFGGTLGTFGQSNFGQLSATPSSVTVPVPVTNPFG
TLPAMPQMSIARAGTAPSIQYGISSMPVVEKSAPVRISSLLTSRHLSQRRIRLPARKYNP
KNDNMRVPFFSDDEETPSTPKADALFIPRENPRALIIRPTEQWPLGASAMKTSSIKDTST
RVRENESPVENGTVKEKVQPVKVNHKPNGVHDDHSNQKDESYVTLNGHRAGEAAIVYEHG
ANIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGSIKFLGETDVR
RLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGVQYKEGPKIE
KYKEMLKRKAEDQGAEFISYDPIKGEWKFSVNHFSEYKLGDEDKQDDQDDCAAALGC |
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| NT seq |
3054 nt +upstreamnt +downstreamnt
atgttcggttcaactaatccatttggccagtcttctagtagcccatttggatctcaatca
atctttgggcagaacaataatgcaagtaacaatccatttgctcccaaaccatttggtaca
acaacaccttttggttcaacagggagttccatatttggaggcacttcaactggggtgttt
ggtgcaccccaatcatcttcaccattttcgtcagccacaacttttggtgcttcgtcatct
cccgcgtttggaagttcaatgcctgcctttggagcatcttctactccatcttttggtagt
tcatcatcttcattcggtgggtcttctatctttggccagaagcctgcttttggatttggg
tccacttctactcaaacaagcccttttggaagcacaactcagcaatctcagcctgcattt
ggaagcagtttatttggttcctcaacaccttttggagcatcaagtcagcctgcatttggt
gcaacaagcaccccagcttttgggaccagcaaccctgcctttggagctaccagcacccct
gcctttggagctaccagcgcaccagcctttggtgctaccagcaccccagcctttggtagc
acaggaactgcatttggtgcatccagtgctccagcttttggatctggtggagcatttggg
gcttctagcactcctctttttggatcatcaagcacttcggccttcggggcttcgagtact
cccgctttcggggcttcgagtgctcccgctttcggggcttcgagtgctcctgcattcggg
gcttcgagtactcctgcattcggggcatccagtgctggatcgttcagttttggatcctct
ccagcttttggccagtcaacttcggcatttagtagcagcccatttggaaccagtacatct
ccctttggagctcagagttctccttttggaggccagagtacaacaccgacatttggaagc
actggctttggccaatcaacttttgggggtcaacgtggtggaagtcgaatagctgcttat
gctcctacgactgaggcagagactggcagtgcttcacagcctgctggaaagttggagtca
atatcttccatgcctgtctacaaggataaaagccatgaggagctaagatgggaggattat
cagttgggagataaaggaggtccgcttcctgctggtcagtctgctggtggcattggattc
ggtgcgtcagctgctccatcaagcccttttgctccttcaccagcatttgggcaatcatct
gccagtccattttcctcctcaacaatgtctaatttgtttgctcccaaaacttcaaccttc
actagttcaagttttggaacttccacttcaacttctgcttttggttcttctccttttggt
gtgtcatcatcagctaacccttttggatcaacttcatctgcaacaccttcaatatttggg
tcgacatcaactcccacatttggcaccagctcatctccagcttttgggtcatcaccatcc
ctcttcagcagtacagcacctcagggaacggtttcatcatttggttctggcatgaacttc
ggtagtcagtcttcacctttgttcagttctgctgccactggacagacaggttctgctttt
ggacaggcaacctcttcattcggacagagtaccatgccttcttttggccagtcaaactta
tttagtacgccttcccctggcttttctggtggcattttctcaagcactccttcattagtc
ccttctagcacaccatcgggctttggtcaaacaactccttctgtttctatgccatttcaa
ctggctcagcctgctcagactgctggtgcttttggctttagcaacttcgggcagacacaa
gcaggtaatacaagtaactttggtggcactttgggcacttttggtcagagcaactttgga
caattgtctgccactccaagttctgttactgttcctgttccagttacaaatccgtttgga
acactacctgcgatgcctcagatgtcaattgcccgagcgggaactgcaccttcaatccaa
tatgggatttctagtatgcctgtggtcgaaaaatcagctcctgtcaggatatcttcctta
ttgacttctcgacatttgtcgcaaaggcggattagattgcctgcaaggaaatataatccc
aagaatgataatatgagggttccatttttcagtgatgatgaagagacacccagcacacct
aaggcagatgctcttttcattcctagagaaaacccaagagctcttattattcgtcccaca
gagcagtggcctttaggtgccagtgcaatgaagacatcatcaattaaagatacatctacc
cgcgtacgtgagaatgaaagtccagtggagaatggtactgtcaaggagaaagttcaacct
gtcaaagtcaatcataaacctaatggagtccatgatgatcattctaatcaaaaggacgaa
tcttacgtgacgcttaatggccatagagctggtgaggctgcgatcgtctacgaacatggg
gccaacattgaggcactgatgccaaagctccgacgctctgactattatacagaacctcga
atccaagagctagcggctaaggaaagggccgaaccgggattctgccgtcgtgttaaggac
tttgtggttggacgccatggttatggcagcatcaagttcctgggtgaaacagatgtgcgg
cggcttgatctagagtcccttgttcagtttaacaaccgtgaggtgatcgtttacatggat
gacagcaagaaaccacctgttggacaaggtcttaataagcctgctgaagtaactctcctc
aatataaaatgctttgacaaaaagactggagttcaatataaggaaggaccaaaaattgag
aaatacaaggagatgcttaagaggaaggctgaggaccaaggtgctgagttcatatcttat
gatcccatcaagggtgagtggaagttcagtgttaatcacttcagtgagtataaactaggg
gatgaagataagcaagacgaccaggatgattgtgctgctgccctaggttgctga |
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