Citrus sinensis (Valencia orange): 102620218
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Entry
102620218 CDS
T02983
Name
(RefSeq) nuclear transcription factor Y subunit A-1-like isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102620218
Transcription factors [BR:
cit03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
102620218
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
102620218
NCBI-ProteinID:
XP_006489921
LinkDB
All DBs
Position
9:join(6293184..6293466,6294251..6294363,6294576..6294647,6295444..6295608,6297229..6297693)
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AA seq
365 aa
AA seq
DB search
MLRSMHQNKSSNSSGPEANSNNSFTISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPIN
GVLVAKTSKSQVNSGMDGGADATKEMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEYLT
QPSQLELVGHSIACASYPYSDSYYGGAVPAYGQQALVHPQSIGVHSARMALPLEMAEEPV
YVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLD
SQTSNGTVTNGTSSNVAVSTLPPNSSSSESVATNYSRGTADSSTGCREVTEPQVHKMQQQ
QRCSNGNGQTYYEGNGNGCYSHHQGFQLFKYHSLPDNKVEEGDFSRQQSGRIVENRAQHR
ALTIK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgttacgaagcatgcaccagaataaatcgagcaatagttcaggacctgaagctaacagc
aataattcattcacaatttcttctcaaccttggtggcgtggtgtagggcatgatagtacc
tcccgagctatgttacaaggcggcattggaaatatttcttcgccaagagagccaataaac
ggtgttttagtggctaaaaccagcaaatcacaagttaacagtgggatggatgggggagcc
gatgcaaccaaggaaatgctaatgagtgtggcttcacaagcagatggaaaatttggagga
cagcaaccatcacagcattctgtgtcccttatgcatccgcaattcagtgaatacctcaca
caaccttcacagctggagcttgttggccactctattgcatgtgcatcatatccgtattcc
gattcgtattatgggggagctgtacctgcttatggacagcaagctttagtccatcctcaa
agcattggcgtgcattccgctagaatggccttgcccctggaaatggcagaggaacctgtt
tatgtaaatgccaagcagtatcatggaattctgagacgaaggcagttgcgtgccaaggct
gagctagaaaggaaactgataaaagttagaaagccctatcttcatgagtccagacattta
catgctatgagacgggcaagaggttgtggaggtcgttttgtgaatacaaagaagcttgat
agtcaaacttctaatggtacagttaccaatggtaccagctcgaatgttgctgtttcaaca
ctaccaccaaactcttctagctctgaatctgtagcaaccaattactccaggggtacagct
gattcatccactggttgtcgagaagtaaccgagccccaagtgcacaaaatgcaacagcaa
caaaggtgctccaatggcaatggccagacttattatgaaggcaacggtaacggatgctac
tcacatcatcagggatttcagttgtttaagtatcactcgcttccagataataaggtggaa
gaaggagatttctcgaggcagcaaagtggaagaattgtggaaaacagggctcaacacagg
gccctgaccatcaaatga
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