Citrus sinensis (Valencia orange): 102620334
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Entry
102620334 CDS
T02983
Name
(RefSeq) YTH domain-containing protein ECT2 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102620334
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102620334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
102620334
NCBI-ProteinID:
XP_006493730
LinkDB
All DBs
Position
9:join(133664..133706,133987..134054,134205..134355,134487..134563,134873..135307,135386..135940,136101..136313,136403..136564,136898..136978)
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AA seq
594 aa
AA seq
DB search
MAAAAAPHFPLPHQPLEEMMTNLEVVHTSSQIPNSIKDGSPLDATSSISAAGDAIGSARE
SDLDHDSVATDQNLSYQTGAHYGYYYSGHDGSFWQLDDQGYYVASDGIELQYPVIQADNG
SLMYVMPAFQAACSPYNPYLPVTTFAVDGQYLGQQPFSTSPMVQPSITPPGYYSNVLSYG
EFIPSPYPCDPSFMVGDVTPKIPGSKSNRSSASHPHASLSKKFPQSEFSNPSEKKSSLQS
LNVSPDHGVRSQLKLMSKALQHVSTLQPDAPGKGYLQLAKFPLYNQGKVGVVYSHGPVNY
KANAPGWGGNEKTKTRSRDNSISDFSLSNEQNHDTSTTSNKDALESGANAVGALGTNEKG
NSDSISSLIWKDQYNLPDFRIKYDHALFFVIKSYSEDDIHKSIKYSVWSSTPNGNKKLDA
AYEDAQSRIAEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGYFPV
KWHIIKDVPNPQLRHIILENNDKKPVTNSRDTQEVKFPQGIEILNIFKNYPSKTSILDDF
DFYESRQKVMQEKKVRLSVSRLDQIQIQSKADDLTSSFQSIGLSAVENVEGCKE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgctgctcctcatttcccacttccccatcaacctttagaggaaatgatg
acgaaccttgaggttgttcatacttcttctcaaattcccaattccattaaggacggtagc
ccattggatgcaacatcctctatttctgcggcaggagatgcaattggcagtgcgagagag
agtgatttggatcatgattcggtggcaaccgatcaaaacctatcttatcagactggagca
cattatggatattactattcaggccatgatggttccttctggcaattggacgaccaaggg
tactatgttgccagtgatgggatagaacttcagtatcccgttattcaagcagataatgga
tctttaatgtatgtcatgccagcatttcaggccgcttgcagtccatacaacccttatctg
cctgtaactacatttgctgtggatgggcagtaccttggtcaacagccgttttcaactagc
cccatggttcaaccatccattactccccctgggtactattccaatgttctttcctatgga
gagttcattccgtcaccttatccatgcgatccatcatttatggtaggtgatgtaactcct
aaaatacctggttcgaaatctaatagatcttcagcaagtcatcctcatgcttctctttca
aaaaagttccctcaatctgaatttagcaatccatcagaaaagaagagctctttacaatca
ttgaacgtttcaccagatcatggtgtacgcagccagttaaaattaatgagcaaggctctg
caacatgtttcaactttgcagccagatgctccaggaaaaggttacctccaattagcaaag
tttccgctgtataatcaggggaaagttggagtggtctattcacatggccctgttaattac
aaagccaatgccccaggttggggtgggaatgaaaagacaaaaacaagaagcagagataat
agcattagtgattttagtttgtctaatgagcagaatcatgatactagtacaaccagtaat
aaagatgctttggaatctggagctaatgctgttggagcgttgggtactaatgagaaagga
aacagtgatagtatatcttctcttatttggaaagatcagtataatcttcctgactttcgg
atcaaatatgatcatgctcttttctttgtcatcaaatcttacagtgaggatgacattcac
aaaagcattaaatacagtgtttggtctagtactccaaatgggaataagaagctggatgct
gcgtatgaagatgcacaaagcaggattgctgagaaaggcagcaaatgtcctgtttttctt
ttcttttcggtgaatgcaagtggtcagttctgtggagttgcggagatgataggccgagtg
gatttcaataagaatatggatttttggcaacaggataagtggaatggttatttccctgtc
aagtggcacattataaaagatgttccaaacccgcagttacgacatataatacttgaaaat
aatgacaagaagccagtaaccaatagcagagacacacaggaggtgaaatttcctcagggt
attgaaattttgaacatatttaagaattatccttcgaagacgtccatattggatgatttt
gatttttatgaaagccgtcaaaaggtgatgcaagaaaagaaagtaagactatctgtgtcc
cgtcttgatcagattcagatacagtcgaaagcagatgacttaacctccagctttcagtca
ataggtttatctgctgtagaaaatgttgagggctgcaaggaataa
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