Citrus sinensis (Valencia orange): 102620336
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Entry
102620336 CDS
T02983
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102620336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102620336
Membrane trafficking [BR:
cit04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102620336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
GLF
Motif
Other DBs
NCBI-GeneID:
102620336
NCBI-ProteinID:
XP_006472930
LinkDB
All DBs
Position
5:join(34000669..34000758,34001069..34001270,34001401..34001480,34001985..34002212,34002339..34002464,34002587..34002667,34002749..34002890,34003002..34003180,34003857..34004012,34004312..34004377)
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AA seq
449 aa
AA seq
DB search
MVLVTAARDYINRMLQDISGMKVLILDSQTVSAVSVVYSQSELLQKEVFLVELVDSIYKS
KESMSHLKAVYFLRPSSENIQHLRRQLANPRFGEYHLFFSNMLKDTQIHILADSDEQEVV
QQVQEFYADFVAVEPYHFTLNIPSNHLYMLPAVVDPSSLQHFCDRVVDGIAAVFLALKRR
PVIRYQRTSDIAKRIAQETTKLMYQQESGLFDFRRTEISPLLLILDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLRSIGDFPKDQQEVVLSSEQDTFFKANMYENFGDIGMNIKRMV
DEFQQVAKSNQSIQTIEDMARFVENYPEYKKMHGNVSKHVTLVTEMSKMVEERKLMLVSE
TEQELACNGGQGAAFEAVTNLLNNENVSNIDRLRLVMLYALRYEKDSPVQLMQLFNKLAS
RSAKYKPGLVQFLLKQAGVDKRTGDLYGN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggtcctggtaacggccgcacgtgattacatcaaccggatgttgcaggacatctccggc
atgaaggttctcattctcgattctcaaacggttagtgctgtaagtgtggtgtattcacag
tctgagttacttcagaaagaagtgtttttggtagagttggtggattccatttacaagtcc
aaagaatccatgtctcatcttaaagcagtttattttcttcgtccatcgtccgagaatatt
cagcatttgcggcgccagctggccaatcctaggttcggagagtatcacctatttttctcc
aacatgttgaaggacacacagattcatattttagctgattcagatgagcaggaagttgtg
cagcaagttcaggagttttatgccgattttgtcgcagttgagccttatcattttactctg
aatataccctcaaatcatctttatatgctcccagcagttgtagacccttcaagtttgcag
cacttctgtgaccgggttgttgatggtattgcagcagtttttctggcattgaaacgtaga
ccagttattaggtaccagaggacctcagatattgctaaaaggatagcacaggaaacaact
aagctgatgtaccagcaggaaagtggtctttttgatttcagacgtacagaaatctctcca
ctgctcttaatacttgatagaagggatgatcctgtgactccgttgctgaatcagtggacc
tatcaggcaatggttcatgaactgattggcattcaggataataaagtggatttgagaagc
attggtgactttccaaaggatcaacaggaggttgtgctgtcatcagaacaagataccttt
ttcaaagcgaacatgtatgagaactttggagatatcggaatgaatatcaagcggatggtg
gatgagtttcagcaggttgcaaaaagtaaccaaagtattcagaccatagaagacatggcc
agatttgttgaaaactatccagagtataaaaaaatgcatgggaatgtttcaaagcatgtc
acactggtcacagaaatgagcaagatggttgaagagcgaaagcttatgttggtttcggaa
acagaacaggagttggcttgtaacgggggccaaggggcagcttttgaggcagtgacaaat
cttttgaacaatgaaaatgtatctaacattgaccgtctgcgcctggttatgttgtatgct
ttgcgctatgagaaggatagcccagttcagttaatgcagcttttcaacaagctagcttct
cggtctgcgaagtacaagcctgggctggtgcagttcctcttgaagcaagcaggtgtagac
aagcgaaccggggatctttatggaaattga
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