KEGG   Citrus sinensis (Valencia orange): 102620438
Entry
102620438         CDS       T02983                                 
Name
(RefSeq) uncharacterized protein LOC102620438 isoform X1
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03440  Homologous recombination
cit03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102620438
   03460 Fanconi anemia pathway
    102620438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102620438
Enzymes [BR:cit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     102620438
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     102620438
   FA (Fanconi anemia) pathway
    Downstream FA components
     102620438
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 HBB
Other DBs
NCBI-GeneID: 102620438
NCBI-ProteinID: XP_006473805
LinkDB
Position
5:complement(join(38487867..38487899,38487988..38488107,38488240..38488308,38488388..38489249,38489426..38489928,38490038..38490162,38490345..38490392,38490580..38490701,38490800..38490828,38491098..38491142,38491270..38491466,38491681..38491837,38491937..38492020,38492111..38492204,38492601..38492709,38493335..38493430,38493528..38493600,38493679..38493766,38493922..38493992,38494081..38494154,38494233..38494294,38494437..38494578,38494661..38494761,38494871..38494915,38494998..38495062,38495512..38495587,38495967..38496060,38496165..38496519))
AA seq 1312 aa
MVSEANPNPNYRKPLNAYHVGGIQVEFPYQPYGSQLVFMCRVISTLDRAQRDGHCHALLE
SPTGTGKSLSLLCSTLAWQQNCKLKNQLANISHSKPDTEAVTDPLANGGGFIPESQPSTI
PPSTNGQTAQVAMNNKNVKKKMTPTIFYASRTHSQISQVISEYKKTAYRVPMAVLASRKH
YCTNKYVRDKENIDEECKLLLGDRNLGCPQFKNVHKVRGHPSLQKGGCHEVHDIEDLVNV
GQVVRGCSYYAARSMADDAQLVFCPYSYIINPVIRGAMEVDIKGAILILDEAHNIEDIAR
DAGSVDIDEDVLLKLQMELEQVCSVNPMIYQPLIEMTQDLVGWIERRKATLAKREFQHFF
SCWTGDKALRELQEANISRQCFPILLECATKAIKEATDTESELPHLSGMSVITLEGLFSS
LTYFFSRNGSHVSDYQLALQKYIKRDSKNPGGNWTHTLSLWCLNPAVVFKDVAELSLSII
LTSGTLSPMNSFSSELGVQFGTCLEAPHVIDVDLQVLTSVISTGPDNYPLNASYKTADGY
AFQDALGKSIEEICNVVPGGSLVFFPSYKLMEKLCNRWRETGQWSRLNAKKPLFVEPKGG
SQEDFEIVLKHYYNSISQGSKCAVVRKKRVKREGNNDLNTIESQENANKKGASFLAVCRG
KVSEGIDFSDDNARVVIVVGIPFPNINDIQVSLKKKYNDTYRSSKNLLSGNEWYCNQAFR
ALNQAIGRCIRHRFDYGAIILLDERFQEERNRAHISKWLRKSIKQYDSFDASLEGLKSFF
RDVKGWVGKKMFNGLENSDNDVDHVSSMDQCKEVTKQNTQELNKSDHSGQNVQSISKYDP
FSHQKSQGNFEVQTSLQTDQNNSCIEYIDLERMNDKNNHSIDSSKGSTRKENKKLNSYDN
SGQKLHSSVKYDSFPGLNLLDEVEVQEFVQLDRVSSCKDYINTQCSLQKSSRCCEASSMP
FSNEDPELLLVKETPAMDDNNTMASPGSLSKDGNSSSTIFQASTQSPDQLSVHSQSLTNP
VRVPSSAQPEMVVTPEKEVTGDTSNLPPERDSSLSSSVNSHTQKRRKTMVSPSVDLMLMA
SREANRRIEFNSETNYVKNKSKTSNNCAESHLSSTPVMDKTLQISCSLCRSPLGLPENHL
YVRCSVTSSAKAHLVSLLKQRQELCANVTSIPVIMTDISSVDQLLTNQSFGGASGQGIWC
EEDGCVYNTLFCPFCSSPSNCLGVQIVASNALNFQLLNKILFYLDRLEIRIPESGKFKSE
AKDSSPITHSAMDKVAAFSCIEKFSYSPILEDSGGWRSTKSKLRLPKKGRGS
NT seq 3939 nt   +upstreamnt  +downstreamnt
atggtctcagaggcaaacccaaaccctaattacagaaagcccctgaatgcgtaccacgtc
gggggaatccaagtggagtttccgtaccaaccatacgggtcgcagcttgtgttcatgtgc
cgcgtgatatcgacgcttgatcgagcgcaaagagacggtcactgtcacgcattactcgag
tctccgaccggtactggaaaatctctctcgcttctttgctcgactctcgcttggcagcag
aattgtaaattaaagaatcagttagcaaacatctctcactccaaacctgataccgaggcc
gtcaccgatcctctggcaaatggtggcggattcatccccgaatcacagccttcaactatt
ccgccgtcaacaaatggccagacggctcaggttgcgatgaacaacaagaatgtgaagaaa
aagatgacgcctacaatattttatgcatcgaggacacattcacaaatttctcaagtgatt
tctgaatacaagaaaactgcttatcgggtgccaatggcagtgttggcttcgcgtaaacat
tattgcacaaacaagtacgtacgtgacaaagagaatattgatgaagaatgcaagctgctt
ttgggggatcgaaatttgggttgtcctcaatttaaaaatgtgcataaagtcagaggtcac
ccatcacttcagaaaggaggttgccatgaggttcatgatattgaagatctggtgaatgtt
ggacaagtcgttagaggatgttcatattatgctgcacgctccatggcagatgatgcgcag
ttggtgttttgtccctacagctacatcattaatcctgtcattcggggtgctatggaagtt
gatattaaaggagccattttaattcttgatgaagcccacaatatcgaagacattgcccgt
gatgccggtagtgtggatattgatgaagatgttttgctaaaattgcagatggaactagag
caagtgtgctctgttaatcccatgatttaccaaccattaattgaaatgacccaggacctc
gtaggctggattgagcgcaggaaagcaacattagcaaagcgggaatttcagcacttcttc
tcttgttggactggtgataaagctttaagagaactccaagaagctaacatctcacggcag
tgctttccaatattgctagaatgtgccacaaaggcaatcaaagaagctacagacacagaa
tcagagttacctcatctgagtggcatgtcagtcataacattggaagggttattctcctca
cttacctatttcttctcaagaaacggttctcatgtatctgattatcagcttgctttacag
aaatatattaaaagagattcaaaaaaccctggtggaaactggacacatactttaagtttg
tggtgcttgaatccagctgttgttttcaaggatgttgctgagctttctttgtctattatt
ttaacatcggggaccttatcaccaatgaattccttctcttctgagcttggagttcaattc
ggaacttgtctggaggctccgcatgtcatcgatgttgatttgcaggtgttgacttctgta
atctccactggtccagataattatccattgaatgcaagttataaaactgcagatgggtat
gcttttcaggatgcccttggcaaatctatagaggaaatatgcaacgttgttcctggtggc
tctcttgtattcttccctagttataagttgatggagaaactgtgcaatcgttggcgtgaa
acaggccaatggtctcgacttaatgcaaagaaacctctttttgtggagccaaaaggggga
agccaggaagactttgagattgttttgaagcattattacaactcaatttcacaaggcagt
aaatgtgctgttgtgagaaagaaaagagttaagagagaaggcaataatgacttaaacaca
attgagtctcaggaaaatgctaataagaaaggagccagtttccttgcagtttgccgtgga
aaggtttcagaaggaattgacttcagcgatgataatgctcgagtggttatagttgttggc
ataccatttccaaacataaatgatattcaagtttcattgaagaagaaatataatgataca
tatagatcatcaaaaaatcttctaagtggtaatgagtggtactgcaaccaagcctttcga
gctctaaatcaagctataggacgctgcataagacataggtttgactatggagccatcatc
ttattagatgagcgctttcaagaggaaaggaatagagctcatatttctaagtggctaagg
aaatccattaaacagtatgatagctttgacgcatcactagagggtttaaagtcttttttc
agagatgtcaagggttgggttggcaagaaaatgtttaatggcttagaaaattctgacaac
gatgtggaccatgtctcttctatggatcaatgcaaagaggtgacaaaacagaatactcag
gaacttaacaagtctgatcattctggacagaatgtacaatctataagcaagtatgaccct
ttttcccatcagaagtctcaaggtaattttgaagttcagacatctttgcaaactgatcag
aacaacagctgcatagaatatattgacctggaaagaatgaacgataaaaacaatcattct
attgattcaagcaaagggtcaacaaggaaagaaaacaagaaactgaacagttatgacaat
tctggacagaagctacactcttcagtgaagtatgactcttttcccgggctgaacttgtta
gatgaggttgaagttcaggaatttgtccagctagatagagtcagtagctgcaaagattat
atcaacacacaatgcagtttgcagaaaagttcaaggtgctgcgaggcttcatccatgcca
ttctccaatgaagatccagaattactccttgtcaaggaaacccctgctatggatgataat
aataccatggctagtcctggatccttatctaaggatgggaactctagttcaaccatattt
caagcatctacacaatctccagatcaattatcagtccattcgcagtctttgacaaatccg
gtccgagtcccttccagcgcccagcctgagatggtagtcactcctgaaaaagaagtcact
ggagacaccagcaatttgccaccagaaagagattcgtctttgagttcgagtgttaattca
catacccaaaaaaggaggaaaaccatggtttcaccttcagttgaccttatgttaatggca
agcagagaagcaaatcggagaattgaatttaattcggaaaccaattatgtgaaaaacaaa
tccaaaacgtcaaataattgtgctgaatcacatttgtcctctactccagttatggacaag
actttacaaatttcatgttcactctgtaggagccctttaggtcttcctgagaatcatcta
tatgttaggtgctcagttacttcatctgctaaagctcacttagtatctcttctgaaacaa
agacaggaactgtgtgcaaatgtaacaagcatacctgttatcatgactgacatttcatca
gttgatcagctactcaccaaccagtcttttggaggtgcctcaggacagggcatatggtgt
gaagaggatggatgtgtatataatacccttttttgccccttctgcagtagccccagcaac
tgtcttggcgttcagatagtggcaagcaatgcattgaactttcagttacttaacaaaata
ttgttttacttggatcgtctggaaattagaattcctgaatctggaaaattcaagtcagag
gccaaggattcatcaccaattactcattcagccatggataaagtcgctgctttcagttgc
atagaaaaattttcttattctccaatactggaagattcaggagggtggaggtccacaaaa
tcgaagctgagactaccaaagaaaggccggggttcctaa

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