Citrus sinensis (Valencia orange): 102620452
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Entry
102620452 CDS
T02983
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cit03110
]
102620452
Chaperones and folding catalysts [BR:
cit03110
]
Heat shock proteins
HSP100
102620452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_18
nSTAND3
bpMoxR
AAA_14
AAA_7
IstB_IS21
ATPase_2
RuvB_N
AAA_28
TniB
NBD_SMAX1
TsaE
DUF815
NACHT
RNA_helicase
Zeta_toxin
Mg_chelatase
AAA_25
ResIII
AAA_19
ABC_tran
T2SSE
DNA_pol3_delta2
DUF87
Torsin
DUF2987
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
102620452
NCBI-ProteinID:
XP_006477653
LinkDB
All DBs
Position
3:join(7959926..7961075,7961214..7961395,7961497..7962402,7962488..7962685,7962772..7963071)
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AA seq
911 aa
AA seq
DB search
MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQ
SAERVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED
SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA
LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTVSILRGLKEKYEG
HHGVRIQDRALVVAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
MQLEIELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMRYKKEKERIDEIRRLKQKR
EELLFALQEAERRYDLARAADLRYGAIQEVEAAIGQLEGNQSDENLMLTETVGPDQIAEV
VSRWTGIPVTRLGQNEKERLIGLAARLHNRVVGQDEAVNAVAESVLRSRAGLGRPQQPTG
SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG
GQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSN
LGAEHLLSGMMGKVTMQVARDQVLQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQ
MKDVAIRLAERGVALAVTDAALDIVLAESYDPIYGARPIRRWLEKKVVTELSRMLVREEI
DENSTVYIDASPKGDNLVYRVQKNGGFVDAATGRKSDVLIQIPNGPRTDPSQAVKKMKIE
EIVDDDEMVDD
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgacaaattcacccacaagaccaatgaggccattgccatggctcatgaactg
gcaacaagcgctggtcatgcgcaattcactcctctgcatcttgcagttgcgctgctatct
gaccccagtggcatctttgctcaggcaatcaacaatgctggtggcgaaaatgctgcgcag
tcagcagaacgagtgttcaatcaagctatgaagaaactcccatctcaaactccagccccc
gatgaaattccagctagtaccacactcatcaaagtaattagacgtgcccaagccgctcaa
aaagcgcatggagacacccatttagctgttgaccagttaattctaggacttcttgaggat
tcccagattggggatttgttcaaggaagctggagttgccgtagcaagagtgaaatccgag
gtggaaaagcttcgtgggaaggaagggaggaaggtggagagtgcttcaggggatactact
ttccaagctctcaagacgtatgggagagaccttgtcgaacaggcaggaaagcttgatcct
gtcattggccgagatgaagaaattagaagggttgttcgaattctgtcaaggaggactaaa
aacaatcctgttcttattggagagccaggagttggtaaaaccgctgtggtagaaggattg
gctcagagaattgtgcgaggagatgtgcctagcaaccttgctgatgtgaggctcattgct
ttggatatgggtgctctggttgcaggcgccaagtataggggagagtttgaagagaggttg
aaggctgttctgaaagaagtagaagaagctgagggaaaagtgattttgtttattgatgag
attcaccttgtccttggagctggtcgaaccgagggatcaatggatgctgctaacctcttt
aagcctatgcttgcaagaggccagcttagatgtattggtgctaccacgctcgaggagtat
agaaagtatgtggagaaagacgctgcatttgagagaaggttccaacaagtatatgtggct
gaacctagcgttcctgatacagttagcattcttcgtggattgaaggagaagtatgagggt
catcatggtgttcggattcaggatcgtgctcttgttgttgcggcacaactatcagcacga
tatataacaggacgtcatctcccagacaaggcaattgatttggttgatgaagcttgcgca
aatgtgagggtgcagcttgatagtcagccagaggaaattgataatctagagaggaagaga
atgcaattagagattgaacttcatgcgcttgaaaaggaaaaggataaggctagtaaagca
cgacttgttgaggttcgaaaggaacttgatgatttgagggacaaacttcagcctctgatg
atgaggtacaaaaaagagaaggaaaggattgatgagattcgacggcttaagcagaagaga
gaagagctcttatttgccttgcaagaggctgaaagaagatatgatttagcaagagcagct
gatttaagatacggggcaattcaagaagtcgaagctgcgataggccaacttgaaggaaac
caatctgatgagaacttaatgctcacggagactgttggcccagaccaaatagcagaagtt
gtgagccgatggactggtatccctgtcactaggctcggccagaatgaaaaagaaagatta
attgggctggctgcaaggttgcataacagggtggttggacaagatgaagcagtcaatgct
gttgcagagtctgttcttcgttcaagggctgggttgggtaggccgcagcaaccaactggc
tcatttcttttcttgggtcctactggtgttggtaagacagagcttgccaaggccctcgca
gagcaactctttgatgacgagaatcttctagtgagaatcgacatgtctgagtatatggag
caacattctgtatcacggctgattggtgccccaccagggtatgttggacatgaggaaggt
ggacaacttactgaggctgtgaggagaaggccttatagtgttgtgttgtttgatgaagtg
gaaaaagctcacatttctgtgtttaatactctacttcaagttttggatgatggaagatta
actgatggccaaggccgtacagttgactttagaaacacagttattatcatgacctcaaac
cttggagcagagcacctcttatcgggaatgatgggcaaggtcacaatgcaagttgcacgt
gatcaagtcctgcaagaggtgaggaagcactttaggccagagctgttgaaccgtcttgat
gagattgttgtgtttgatcctctctcacacgaacaactaaggaaggtggcaaggctgcaa
atgaaggatgttgcaattcgtcttgctgagaggggtgtagcattggcagtaactgatgct
gcgttagatattgtattagccgagagttatgacccgatttatggtgcaaggcctattcgg
cgatggctggagaaaaaggtagtgactgagctatcaagaatgcttgttcgcgaagaaatt
gacgagaactcaacagtgtacatagacgccagtccaaagggcgataatttggtgtaccgg
gttcagaaaaatggagggtttgtggacgcagctactgggcggaaatctgatgtattaatt
caaatccccaatggcccgcggactgatccgtcgcaggctgtgaagaagatgaagatcgaa
gaaattgttgatgatgatgagatggttgacgattga
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