Citrus sinensis (Valencia orange): 102620538
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Entry
102620538 CDS
T02983
Name
(RefSeq) transcription elongation factor TFIIS-like isoform X2
KO
K03145
transcription elongation factor S-II
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102620538
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102620538
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med26
TFIIS_M
LTN1_E3_ligase_6th
Arm
UVSSA_N
HEAT_EZ
UTP20_N
Motif
Other DBs
NCBI-GeneID:
102620538
NCBI-ProteinID:
XP_015381394
LinkDB
All DBs
Position
3:join(35375329..35375484,35375903..35376307)
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AA seq
186 aa
AA seq
DB search
MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPM
LKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSG
NVPKKLISCMIKCNDCIREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILMESA
MYEKWG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaagtgatggacctgtgtgaagccgcgaaaagagcggcagtggcagcagta
tggaaggagggagtggtggaggaagcacggtgcattgatgctttggatcagatcaagaac
tcttcaatcacttatcaacttcttgtttctactcaggttataagacatcttctacctatg
ctaaaacatcccagtcagaaaatccagaagttagcatatgatctgatttcttcgtggaga
gacatgtgctgggatgttgaagatgttgagtatgttgctgtgacaaagaaagccaagttg
gtggagaatgtcaaagttgaagaagtaactaatggagaagagagacggcatgattctggc
aatgtgcccaagaagttgatcagttgtatgattaaatgcaatgactgtattagggagatc
gtaagggaaaaactttacgatgcattgtccaaggtttctgacgaggctgccgacaaagta
acaattgatctagtgaaggcatgcgatccaattcaagtcgctatattgatggagtctgca
atgtatgaaaagtggggctga
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