Citrus sinensis (Valencia orange): 102620563
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Entry
102620563 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102620563 isoform X1
KO
K13210
far upstream element-binding protein
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102620563
03041 Spliceosome [BR:
cit03041
]
102620563
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102620563
Spliceosome [BR:
cit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102620563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
102620563
NCBI-ProteinID:
XP_006478396
LinkDB
All DBs
Position
3:complement(join(27445525..27446772,27449131..27449247,27449331..27449405,27449490..27449591,27449753..27449938,27450272..27450666,27451157..27451391))
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AA seq
785 aa
AA seq
DB search
MAEEEVLAPASAAAADLKRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFAEAHGS
EVKRPRLDDEKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKTEQHSS
VEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVP
QQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDAD
ADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEI
KVPNEKVGLIIGRGGETIKGLQTRSGARIQVLIPQHLPEGDGSKERIVRVTGDMRQIEIA
QEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPS
QNPHYPHLPYGNYPPQQMAPRSNYGGPPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSI
PGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNHAPVQH
PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYGPPRPGQPGDIPPYQSQ
VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVP
NYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDPSYGSSAPGS
AYAAPTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQM
YAAPR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagaggtgttggctccggcgtctgctgctgcggcggatcttaaaaggaag
ctcgacgatttggagcccgacgaggccttagaacacgcagagggaatgcgtgatgacgag
gccaagaacagcgatgaagtggaaaagaacgttgatggatttgcggaggctcatggatca
gaggttaagcgacctagacttgatgatgagaaaactgaaaagcctgatggtccagttaat
gtgaatggattaaaagaagagaaaccagatgaagtagtggatgctgaacagctgactgag
gatactactaaagaagaagagctagaaagtgcggaagtgaaaactgaacaacattcttca
gtggaagaacaggcttcggttgacaatcagcaaatctctgttaaagaggagacaaaagaa
gtcttattcagtactgaagaggcctttattgatgttaaagaggaaaccaaagaagtcact
gttaaggaggaagaaacagttaaagaagaagaatcagttgaaccctctaatgtggttcct
caacaagtggttgacaattctaagtcagatgatccgtcttcaactgatgattcgaccatg
agccgcaaaattgaggtccctaacaataaggttggggttcttattggcaaggctggggat
accatacggtacttgcagtacaattcgggggcaaaaattcaaattactagagatgctgat
gcggatccccacgctgcaaccagaccagtagaaataataggaactttaagtaatatagac
aaggctgagaaacttataaatgctgtgatagcagaggctgatgcagggggctctccgtca
cttgtagctaggggcttagctactgcacaggcttctggggctgcagaacaagttgagatt
aaagttccaaatgaaaaggttggtttaataattggtagaggtggggagacaatcaaaggt
ctgcagaccagatcaggggcacgcattcaggtattgatacctcaacatcttcccgaagga
gatggttccaaagagaggatagtgcgagttactggtgatatgaggcaaattgagattgct
caagaaatgataaaggaggttttgagtcagactgtgaggccgtcaactctctctggtggg
tttaaccagcaggcttatcgacctcgtgtgcctacgggtcctcctcaatggggtccacgg
ggttctcacccttctcaacctatggcatatgactatccacagcgaggaccttatccatct
caaaatccccattatccacacctgccatatggtaattatcctccacaacaaatggctcca
agaagtaattacggtggtcctcccaatatgcagggtgctgccggtggttatgattactat
ggtgggcaaggaggtcatgtatctgatcgaccggtctctgtctcacattcaacttccatt
cctgggcatccttcagtccctgcacaagcccctgctgggggtccacctccctcccaggca
aattataactacggacagccacatacttcagagtatgggcatcaacaaccttatgcccac
gcagctcctcagcagggctatggacatggatatgatgacaatcatgctccggtacagcat
ccctatggagggcacagcaattctcagcctgtttactcgcagggtgggttgcaatctggt
tatcatcaacatcagtatgggaaaccaccatatgggatgccagcacaaggaacacagccc
caatcttatggtccccctaggcctggtcaaccaggggacataccaccttaccaaagccaa
gttccatcagctcaatcatatggccctaatgtaccacatcaacagcaatacccttatgca
acaagtggacccacgcagcaaacatatccttcatatgggtcagcaccggctcctgacagc
tataatcagcctccagcatctgctccggggtatcctcaacaagctggtcaggcagttcct
aattatcctcagcctggtggtcaacaggcccctagttatgggcaggtagcgcctactgcc
gggtatggacagtacacaaatactcagcaagcttatcccgaacagcctgcaactagtaat
gcaggttatggatatcaagggacacaagatcctagttatggaagtagtgctcctgggtca
gcatatgctgcaccaactgggcagccaggttatgctcaacctgcagcaactcaaccaagc
tatgatcagtctgcatcgcagtcaactgcatatggagtagctcaaggaactgcagcagct
ggttatgggaaaactgtctcacctcagcctggttatcctcaatatgattcaacccagatg
tatgctgcacctcgttga
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