KEGG   Citrus sinensis (Valencia orange): 102620577
Entry
102620577         CDS       T02983                                 
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03410  Base excision repair
cit03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102620577
   03450 Non-homologous end-joining
    102620577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102620577
Enzymes [BR:cit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     102620577
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102620577
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     102620577
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 BRCT HHH_5 IMS_HHH_1 Cdd1 LIG3_BRCT IMS_HHH BRCT_2 PTCB-BRCT NTP_transf_2 DNA_pol_E_B
Other DBs
NCBI-GeneID: 102620577
NCBI-ProteinID: XP_006483782
LinkDB
Position
4:complement(join(27085417..27085515,27085608..27085692,27086249..27086316,27086736..27086816,27087627..27087717,27088192..27088280,27088782..27088835,27088926..27089105,27089593..27089655,27089741..27089871,27089993..27090071,27090228..27090575,27090900..27091037,27091144..27091254))
AA seq 538 aa
MAPKTTRKPTPALDSNGIFTGMRVFLVEKGVQNRRLQIWRQKLVQMGATVEEKLSKKVTH
VLAMDLEALLQQVSKQHLARFKGSVIHYQWLEDSLRLGEKVSEDLYRIKLHPEGENIADR
VLSQIQGNGNTSSDGESSHRKKIKSSTEDVEHFKAESKGDAETNALSEPSNSPMSSESLT
NTLSTASASPDFSSHHITDPSLLYNPPDLNKNITEIFGKLINIYRALGEDRRSFSYYKAI
PVIEKLPFKIESADQVKGLPGIGKSMQDHIQEIVTTGKLSKLEHFEKDEKVRTISLFGEV
WGIGPATAQKLYEKGHRTLDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQK
AGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDL
IFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDFKVYPRDIYAFGLIAWTGNDVLNRRLR
LLAESKGYRLDDTGLFPATYGSGGKQGVRARTSLKFDTEKEVFDFLGFPWLEPHERNL
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggcgccaaaaacaaccagaaaaccaactccagctcttgactcgaacggtatattcacc
ggaatgcgcgttttcttagtcgaaaagggagttcaaaaccgtcgattacagatttggagg
cagaagctggtgcaaatgggggctactgttgaggagaagctatccaagaaagtcacgcat
gttttagcgatggatttagaagcgcttcttcaacaagtcagtaaacaacacctcgcacgc
ttcaaaggaagtgttatccattatcaatggctggaggacagcttgagattaggggaaaag
gtctctgaggatttgtatcgtataaaactgcatccagaaggagaaaatatagcagacagg
gtcttgagtcaaatacaaggaaatggaaatacttcaagtgatggtgaatcatctcatcgg
aaaaagatcaaatcctctactgaggacgtggaacacttcaaagcagaaagcaagggagat
gcggaaaccaatgctctatctgagccatcgaatagtcccatgagttctgaaagtttgact
aacactctgagcactgcaagtgccagtccagatttctccagtcatcatattacggatcca
tccctgctgtacaatccacctgatttaaacaagaatatcactgagatatttggaaagctt
atcaacatatatagggcactgggtgaggatcggagatcatttagctactacaaggctatt
ccagttattgagaagttaccatttaaaattgaaagtgcagatcaggttaaaggcctgcca
gggattggaaagtcaatgcaggatcatattcaggagatcgtaactactgggaaattatca
aagttggagcactttgaaaaggatgaaaaggtacggacaatcagtttgtttggggaagtt
tggggtattggtcctgcaactgcacagaaattatatgagaaaggacaccgtacactagat
gatttgaagaatgaagattcattaacacattctcagagattaggtttgaaatatttcgat
gacattaagacgaggattccacgccatgaggttgagcagatggaacgtcttctgcagaaa
gccggggaagaagttttgcctgaggtgatcattttgtgtggaggatcatacagacgtgga
aaggcttcctgtggagatctagatgttgtaattatgcatcctgatagaaaaagtcataag
ggtttcttgtcaaaatatgtgaagaagttaaaggaaatgaagttcttaagagaggatttg
attttcagcactcacagcgaggagggcaccgattctggtgttgatacgtactttggtctc
tgcacctatcctggtcgagagctgcggcatcgcattgatttcaaagtgtatccaagggac
atatatgcgtttgggctaatagcatggaccgggaatgatgtactaaataggaggttgaga
ttactagcagaatccaaaggataccgacttgatgatacagggctgtttccagctacttat
ggctcaggcggtaaacagggtgtaagggcgagaacaagtttgaaatttgatactgaaaag
gaggtgtttgatttcctgggatttccttggctagaacctcatgaaagaaatttgtga

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