KEGG   Citrus sinensis (Valencia orange): 102620700
Entry
102620700         CDS       T02983                                 
Name
(RefSeq) ubiquitin receptor RAD23b
  KO
K10839  UV excision repair protein RAD23
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03420  Nucleotide excision repair
cit04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102620700
  09124 Replication and repair
   03420 Nucleotide excision repair
    102620700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cit03051]
    102620700
   03400 DNA repair and recombination proteins [BR:cit03400]
    102620700
Proteasome [BR:cit03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    102620700
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      102620700
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE TECR_N UBA_3 UBA_RAD5A Rad60-SLD_2 Ubiquitin_2 Dsc3_N MmeI_C
Other DBs
NCBI-GeneID: 102620700
NCBI-ProteinID: XP_006493449
LinkDB
Position
7:complement(join(15647478..15647594,15647697..15647775,15648203..15648312,15648425..15648472,15648839..15648904,15648986..15649120,15649225..15649402,15649743..15649799,15649878..15649954,15650054..15650092,15651414..15651575,15651786..15651851))
AA seq 377 aa
MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEASVPPPAPTPS
IPASNVTSNVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAA
YNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAETGAAGAAPVSGVPNSSPLNMFPQET
LSGAPAGGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQTEF
LQLINEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRN
EELAANYLLENAGDFED
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaagctcaccgttaagactctcaaaggcagccatttcgagattagggttcagccctcc
gatacggttatggctgtgaagaagaatatagaagatgtgcaaggaaaagacaattaccca
tgtgggcaacagctgttgattcacaatgggaaggtcttgaaagatgagactactctagct
gataataaggtctctgaagatggttttctcgttgtcatgctcagcaagagtaaaacacta
ggctcggctggggcttcctctgctcagcctgctcatactactccaccaacaacggcacca
agctctaattctactcctccacaggaagcatctgtaccgccaccggctccgacccctagc
ataccagcctccaatgtgacctctaatgtgacagcagctaatgcaaatagtgacacctac
ggtcaagctgcttcaaatttagttgctggtaatgatcttgagcagaccattcaacaaata
atggatatgggtggtggaacctgggacaaagaaacagttactcgtgcacttcaagccgct
tataataacccagagcgtgcagtggattacttatactctggaattccagaaacagctgaa
gttgctgtcccagtggctcattttcctgcaagtcaggcagctgaaactggtgcagcagga
gctgcaccagtctctggagtacccaattcatctcccttgaacatgtttcctcaggagacc
ctttcaggtgctcctgctggcggacttggatctcttgacttcctcagaaacaatcaacag
tttcaagcattgcgttcaatggtgcaatcaaatccgcaaattttgcagcccatgcttcag
gagcttggaaaacagaaccctcagttattaagattaatccaagagcaccagacagagttc
cttcagttaataaatgagcctgttgatggttctgaaggagatatgtttgatcagcctgag
caagacatgcctcatgcaattaatgttaccccagccgaacaggaagctatccaacgactt
gaagcaatggggttcgatagagcccttgtcattgaggcgtttttggcatgtgatcgtaac
gaggaattggcagctaactacctattggaaaatgctggagatttcgaggattga

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