Citrus sinensis (Valencia orange): 102620860
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Entry
102620860 CDS
T02983
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102620860
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102620860
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102620860
NCBI-ProteinID:
XP_006467400
LinkDB
All DBs
Position
2:complement(join(32106067..32106285,32106434..32106572,32106696..32106799,32106893..32107600))
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AA seq
389 aa
AA seq
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MASLTTLLLLSCLLANSASTLVAYSLDSYNLPKPAVSSLKVMNVIDSCWRAKSNWAVNRK
ALTDCVVGFGKGTLGGKYGAIYVVTDPSDDPVNPKLGTLRYGVIQTKPLWIIFAKDMVIR
LKNELIMNSFKTIDGRGAKVEIANGPCITIQGVSHVIIHGISIHDCKPGKSGQVRSSPDH
VGRRGGSDGDAIDIFASSYVWVDHCYLARAADGLIDVIHASTAVTISNNCFEQHDKVMLL
GHNDQFTADKIMKVTIAFNHFGPGLIERMPRVRIGYAHVANNRYEDWKMYAIGGSANPTI
FSEGNYFMASNDQNTKEVTKRESYGGWKSWKWRTSKDVFLNGAYFVPSGYGSCAPNYSRA
QSFVVAPGAMVPALTANAGPLSCVVAKAC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttaaccactctccttttgctttcatgtctactagcaaactctgcttcaacc
cttgtagcatattcactagatagctataacttgcctaaacctgcagtaagcagtttgaaa
gtcatgaatgttatagattcatgctggcgagccaaatccaactgggctgttaatcgcaaa
gccttgacggattgcgtggtggggtttggaaaaggcaccttgggaggaaaatacggtgca
atttacgtagtcaccgacccatctgacgaccctgtaaatcctaaattgggaaccctaagg
tatggtgttattcaaacaaagccgctttggatcatttttgccaaggacatggtgataagg
cttaaaaatgagcttataatgaatagttttaagactattgatgggagaggggctaaagtt
gagattgcaaatggaccatgcataacaatacaaggtgttagccatgttataatacatggg
attagcattcatgattgtaagccaggaaagagtgggcaagttagaagcagccctgatcat
gttggtcgtcgcggtggttctgatggagatgccattgatatttttgcatcttcgtatgtt
tgggttgaccattgctatcttgctcgggctgctgatggcctaattgatgtcattcatgct
tcaacggcggttaccatatctaacaactgcttcgaacaacacgataaggtgatgctgctg
ggacacaacgatcaatttactgctgataaaattatgaaagttacaatagccttcaaccat
tttggcccgggacttattgaaagaatgccaagggtccggataggctatgctcatgttgcc
aacaatagatatgaagactggaagatgtatgcaattggcggcagtgctaatccaaccatt
tttagtgaagggaactacttcatggcttcaaacgatcagaataccaaagaggttacgaag
agagagtcttatggcggttggaaaagctggaagtggagaacttcgaaggatgtatttttg
aatggtgcttattttgtaccatctggatatggaagctgtgcaccaaattactcacgtgcc
cagtcatttgttgttgcaccaggggcaatggttcctgctttaacagcgaatgcgggtcct
ttgagctgtgttgttgcgaaagcatgttga
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