Citrus sinensis (Valencia orange): 102620952
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Entry
102620952 CDS
T02983
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102620952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102620952
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
102620952
Prokaryotic type
Archaeal type
TFB
102620952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
102620952
NCBI-ProteinID:
XP_006466774
UniProt:
A0A067GW19
LinkDB
All DBs
Position
7:complement(join(2416380..2417165,2418023..2418181,2419457..2420044))
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AA seq
510 aa
AA seq
DB search
MKCPYCSAAQGRCATTSTGRSITECGSCGRVIAERQCQNHHLFHIRAQDTPLCLVTSDLP
SIPQPQQNDGVDEDPFQPTGFITAFSAWSLVPSPLFLRSSHSFSGQLAELERTFELLSSS
TTSTSSSVMMDNLRAYLQIIDVASILGLDYDICDHAFQLFRDCCSATCLRNRSVEALATA
ALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSIAVHMPRFCT
LLQLNKSAQVLATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGL
TEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTITSGRAPTVKVDSGEVTSVDKD
KQPETKSIKVNEVIETESNGPNADADGAHAPTLKRPSPFSQPWLHFAASNIRTTGEKNQI
VVQGDINEVQPGHQDLDQKLDEDTKPATTTLRPSQFPCTPVSTVTSLTWPFRPPPSMATA
SFQVVDPPKLQPGHIELKGSGVQAGSKNDK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccatactgttcagcagcgcaggggcgctgtgccaccacaagcacagggcgg
tcaatcacggagtgcggctcctgcgggcgagtgatcgctgagcggcaatgccaaaatcac
cacttattccacatccgtgcccaagacaccccactctgcctcgtcacctccgatctccca
tccatcccccaaccccagcaaaacgacggcgtcgacgaagacccgtttcagcccacgggc
ttcataacggctttttccgcgtggtctttggtacccagccctcttttcctccgctcctca
cactctttctccggccagctcgccgagctcgagcgcaccttcgagcttttgtcctcgtct
acgacgtccacgtcttccagtgtcatgatggacaatttgagagcgtatttgcagatcatc
gacgtggcgtccattctgggattggattatgacatttgtgatcatgcttttcagttgttt
agagattgctgttctgctacttgtttgaggaatagaagtgttgaagctcttgccactgct
gcacttgttcaggccattagagaagctcaagagcccagaactctccaggaaatatcaatt
gcggctaacgtaccgcagaaggagattggaaagtacatcaagatactgggagaagctcta
caactaagtcagcccattaatagcaattccatagcagttcatatgccgagattttgcacc
ctcctccaactcaacaaatctgctcaggtgctggcaactcacataggagaagttgtgatc
aacaaatgcttctgcactcggaggaatccaattagcatctctgcagctgccatctatctt
gcctgccagttagaggacaaacgcaagacccaggcagaaatttgtaaggtgactggtttg
acggaggtcacgcttagaaaagtctacaaggaactattggagaattgggatgacctgctc
ccatctaattatactccagctgtccctccggagaaagcatttcctaccaccaccattacc
tcaggccgtgcaccaacggtcaaagttgattcaggtgaagtaacatctgtggataaagat
aagcagccagaaaccaagtcaattaaggtaaatgaggtgatagaaactgaaagtaatgga
ccaaatgccgatgctgatggtgcccatgctcctacgttgaagcggccatcaccctttagc
caaccctggcttcactttgcggcttctaatattaggacaactggagagaaaaatcagatt
gttgttcaaggtgacatcaacgaggtgcagccaggccatcaagatttagaccagaagctc
gatgaggacacaaagccagccactaccactctaagaccaagtcagtttccatgcaccccc
gtttcaactgtgacttcgctcacttggccatttcggcccccgccttcaatggccactgca
agttttcaggttgtggatccaccaaagttacagcctggtcacattgagcttaaaggctcc
ggcgtacaggcaggaagtaaaaatgataagtga
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