Citrus sinensis (Valencia orange): 102621015
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Entry
102621015 CDS
T02983
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102621015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102621015
03032 DNA replication proteins [BR:
cit03032
]
102621015
Spliceosome [BR:
cit03041
]
Complex A
U1 snRNP components
Sm proteins
102621015
U2 snRNP components
102621015
Complex B
U1 snRNP components
102621015
U4/U6.U5 tri-snRNP components
102621015
Complex C
U2 snRNP components
102621015
DNA replication proteins [BR:
cit03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
102621015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin7
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
102621015
NCBI-ProteinID:
XP_006479744
UniProt:
A0A067FZZ9
LinkDB
All DBs
Position
3:complement(join(44234272..44234333,44234446..44234637,44236224..44236300,44236410..44236423))
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AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVNLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPVGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggttcttgatgaagttgaacaatgagaccgtgtcgattgaactgaag
aacggaaccattgttcacggaaccatcacaggtgtggatatcagtatgaacacacatttg
aaaacagtgaaacttacgctgaaggggaaaaatccagtgaacttggatcacctaagtgtg
aggggtaacaatatccgttattatatccttcctgacagcttgaatcttgaaacattgctg
gttgaagagacacctagggtcaagccaaagaagccgactgctgggaggccggtgggacgt
ggtcggggccgtggacgcggtcgcgggcgtggccgtggtcgttag
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