KEGG   Citrus sinensis (Valencia orange): 102621056
Entry
102621056         CDS       T02983                                 
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
  KO
K15164  mediator of RNA polymerase II transcription subunit 13
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102621056
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    CDK-module
     102621056
SSDB
Motif
Pfam: MID_MedPIWI Med13_N Med13_C
Other DBs
NCBI-GeneID: 102621056
NCBI-ProteinID: XP_052290797
LinkDB
Position
2:complement(join(304734..305344,306045..306419,306780..307863,308391..308686,309281..309359,309476..309563,310559..310700,310781..311036,311378..312745,313652..313903,314474..314720,315366..315425,315547..315858,315973..316051,316488..316570,316699..316776,317793..317873,317954..318041,318242..318325,318506..318645,318772..318845,320560..320583))
AA seq 1966 aa
MWTNVFRIGGLHHVSWFQFLPNESDLNALPDKSVKVDQKDAATFLVLSSHLQLQKEGFLS
TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVETAQAAVSRLRVVASGLWVAPGDS
EEVAAALSQALRNCIERALNGLSYLRFGDVFSKYQPSQSEESFRKGHPTIEFIFAATEEA
IFIHALVSAKHIHSLSGGDMEKGFKHSSSSSSSLRLPVIVSPHGMRGRLTGYCPTDLVKQ
VYFRTSNGCVGLPHVSQGSGCQLNGQNCYVEVTMGCPRSGSDKASHINSNSLRNLHKHNV
SESPSVGGGDPKGSPDNMSAYEKTFIYPAEAVLVPVLQTSFSRSSLRRFWLQNWIGPSMA
GSSFLMHCFGNMDSLEGSWIETNGIHAQRGYNSSSNSNNSSISSISGSSSDSDYQMNART
GDLEADADSLTCRQSGLSSNDQLENEGPKLGSKRPRTGMIESFGQMGTGTNASTDFGSVE
NTSAITGVANDQIGPHWDWDDDDDRGMGMDIQALLSEFGDFGDFFENENLPFGEPPGTAE
SQSFMFSAPDCGDVGSSPVVAMDVSDQMLMPNFSSFESFNPLPTMAVEECMGKSQEVTNN
TLTSGQANQSQASSTGEFDHLMKAEALMTFAPEYGAVETPTSELSSSIFRSPYLPKSYRV
ESSNSSSNNYVYGATPPGSPCFDGSDEKNGTPVSKACSGKHDSSALLHSKKYYSHVESSK
EQNDRKSVTHKDSNAKSDGLVLSPFSNLSSTNAIKSLPRKMTEGTLGVEHIFLSKKTVLA
TEVECLMFQASMCRIRHVLLYSSNPSPISLSRFTGSTVLNQLPGDLSSMTESTSGRYELK
KKESIPVRIAGDFDGGLLDGHLNAPVGVWRSVGVAKVSKPTNSSSIEVSPSMPHGSFTEE
GMISYGQRQPLQELLDGLPLLVQQATSFVDVALDADCGDGPYGWLALQEHWRQEFSCGPS
MVHAGCGGTLASCHSLDIAGVELVDPLSADIHASSVISLLQSEIRTALKSAFGSLDGPLS
VTDWCKGRGQSVDAAALGDGSTESISECRDSSSTITVGEALSPSQSSGGGSSSLKVAMDG
TKLDETGQRRLNQDIGSSESDHQLCARLKPTLFVLPSPAILVGYQDDWLKTSATSLQFWE
KAPLEPYALPKPITYNVICPDIDPLTSAAADFFQQLGAVYETCKLGTHSPQNLGNQMEID
SGKSPSSGFVLLDCPQSMKIESNNASLVGSISDYFLSLSNGWDLTSYLKSLSKALKTMKL
GPCSSTQQKEGNSGPCTVIYVVCPFPEPLAILQTVIESSASLGSVAISSDRERALLHSQV
GKALSCPAAVDETSISNVLAISGFSIPKLVLQILTVDEIFRVTSPAINELVLLKETAFTV
YNKARRISRGSSGDVVHSSSLSSRSHSVMNQMASIPGMWKDCVGSRMTGPSLSREGEIDA
SLRPGTWDNSWQATRSGGLNCDPNRNGDFLIQDEIRFMFEPLFVLAEPGSLDHGVSSTFN
GNSTSDDSTGGFMMSGSTAGSADTGSSSQLDRSEQDGFGSGHHKSVPSLHCCYGWTEDWR
WLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFVQILQQGCQILQTCCSPDSGVAK
PRDFVITRIGSFYELEYLEWQKAIYSVGGSEMKQWPLQLRRSVPDGMPSSTNGASLQQQQ
EISLIQERALPSSPSPLYSPHSKASGFMKGGLGQPVGRKQLIGGHTMVDNSRGLLQWVQS
ISFVAISIDHSLHLVHQADSPSSGGTQGGNGVGPSGYLEGFTPVKSLGATPASYILIPSP
SMRFLPPAPLQLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKSVPSMRKDHKNKLKDE
WPSVLSVNLIDYYGGNNISQDKVTRVIIKQGGRTASSEPKDFEVETHLILESIASELHAL
SWMTASPAYLNRRTALPFHCDMVLRLRRLLHFADRELSQQADNPQS
NT seq 5901 nt   +upstreamnt  +downstreamnt
atgtggaccaatgtgtttagaattggaggtcttcatcatgtgtcgtggttccagtttctc
cccaacgaatccgatctgaatgctttgcctgataaaagtgtaaaagtggaccagaaagat
gctgctacatttctggtactttcttctcatctgcaattgcaaaaggagggatttcttagc
acatggacaaattcctttgttggaccttgggatccatcgcaaggtttgcacaatcctgat
gagaaaataaagctctggctttttcttccggggcgtcattcatctgttgagaccgctcaa
gctgctgtatctagattaagagttgttgcttctggactttgggttgctcctggggactca
gaagaggtagcggctgccctctctcaggctttgaggaactgcatagaaagagcattgaat
ggactttcctacttgagatttggtgacgtattttcgaagtatcagccatcccaaagcgaa
gaatctttcaggaaaggacatccgacaattgagttcatctttgctgctactgaagaggca
atttttatccatgctctagtatctgcaaagcatatccattcactttcaggaggtgacatg
gaaaaaggctttaagcattcttcaagtagtagttccagcttaagacttccagtgattgtt
tctcctcatggtatgcgtggtaggctcactggatattgtcccaccgaccttgtcaagcaa
gtgtattttaggacttcaaatggatgtgtaggtctaccacatgtttctcaaggatctggt
tgccagctaaatgggcaaaattgctatgttgaagttaccatgggttgtcctaggtctgga
agtgacaaggcatcgcatataaactcaaactccttaagaaatttacacaagcataacgtt
tcagagtctccatcagtaggaggaggtgatccaaagggatcgccagataacatgtcggca
tatgaaaagacgtttatttatccagctgaggcagtgcttgtcccggtcttgcaaacatca
ttctccagatcttctttgagaagattttggcttcaaaattggataggaccatcaatggct
ggttcatctttcctcatgcattgttttggtaatatggactctctggaaggatcttggatt
gaaaccaatggcatacatgctcaacgtggttataacagtagtagcaatagtaataatagc
agcatcagctccataagtggcagctccagcgatagtgactaccagatgaacgcaagaact
ggtgaccttgaagcagacgcagattctttaacatgtagacagtctggtttatcttccaat
gatcagctggaaaatgaaggccccaaattgggttctaagcgtcctcgaacagggatgatc
gaatcatttggtcaaatgggcactggtacaaatgcttctacagattttggctctgtggag
aacacttcagccattactggagttgccaatgaccagattggacctcattgggactgggat
gatgatgatgacagaggcatgggtatggatatccaagctcttctctcggagtttggagat
tttggtgacttctttgaaaatgaaaatttgccttttggggagcccccaggaactgcagag
tctcagtccttcatgttttctgctcccgattgtggagatgtgggtagcagtcccgttgta
gccatggatgtttctgatcaaatgcttatgcctaatttttcgtcatttgagagcttcaat
ccactgccaaccatggccgtagaggagtgcatgggcaaaagtcaagaagtcacaaacaat
actctgacatcaggtcaagcgaaccaaagtcaagcatcgtcaactggtgagtttgatcat
ttaatgaaagctgaagccctgatgacatttgctccagaatatggagcagttgaaactcct
acaagtgagttatcctcgtcgattttcagaagtccatatctgccaaagtcttacagagtg
gagagttcaaattcaagctcaaataattatgtatatggtgcaacccctcctggttctcca
tgctttgatggatcggatgagaagaatggcacgcctgtctcaaaagcttgttctggaaag
catgactcaagtgctttgcttcactcaaagaaatattattctcatgtggagagctctaaa
gagcaaaatgataggaaatcagtaacacataaagatagcaatgctaaaagtgatgggcta
gtgctatccccgttctctaatttgagttctacaaatgctatcaaatctttaccaaggaag
atgactgagggcacattgggagtggaacatatttttttatctaagaagactgtgcttgcg
actgaagttgaatgtcttatgttccaagcttccatgtgcaggatacgtcatgtactccta
tattccagtaatccctcacctattagcttgagtaggttcactggcagcacggtcttgaat
cagctgcctggtgacttgagttccatgacggaaagcacatctggaagatatgagctcaag
aagaaagaatctattccagtaaggatagctggtgattttgatggaggactactagacgga
cacctgaatgcacctgttggggtgtggcgttcggttggagttgctaaagtttcaaaacct
actaattcatcaagtattgaagttagcccatctatgccccatggttcatttactgaggaa
ggtatgatttcttacgggcaaaggcaaccacttcaggagcttcttgatggtctgccattg
cttgtccagcaagctacctcctttgttgatgtggcattggatgcggattgtggtgatggt
ccttatggttggctagcattacaagaacattggcggcaagaattttcttgtgggccttcc
atggtccatgcaggttgtggagggactctggcttcttgtcattcgctggacattgctggt
gtggagttagtagatccactttccgctgatattcatgcttcctcggttataagtttgctg
caatctgaaattagaacagctctaaaatctgcatttggaagtctggatggtccattgtct
gtcacagattggtgcaaaggccgtggtcaatcagttgatgcagcggccttaggggatgga
tctactgagtctattagtgaatgcagagattcttcaagtaccattactgttggagaagca
ctgagcccatcccaatcttctggcggtggatcatcttcccttaaagttgctatggatgga
actaaactcgatgagacaggccaaaggagattgaaccaagatattggcagttcagagtca
gatcatcaattgtgtgcccgtttgaagccaacactttttgtccttccttcacctgctata
cttgttgggtaccaggatgattggcttaagacatcagcaacctctttacagttttgggaa
aaggcccctcttgaaccatatgctttaccaaaacctatcacttataatgttatatgtcca
gacattgatcctcttacttctgctgcggctgatttttttcaacaactaggagctgtttat
gagacatgcaaactgggaactcattcacctcagaatttgggaaaccaaatggagatagat
tctgggaaatcgccatcttctggttttgttctactggattgccctcaatcaatgaaaatt
gaaagcaataacgcatctcttgtgggatccataagcgattattttctatctctgtccaat
ggctgggacttgacaagctatctaaagtctctctctaaggctctcaaaaccatgaaactt
ggtccatgctcatctacacagcaaaaagaaggaaacagtggtccttgtacagtgatctat
gtggtgtgccccttcccagagcctcttgcaattctacaaactgttattgaatcctctgct
tctcttggatctgttgctatttcatcagatagagagagagctctattgcatagtcaggtt
ggcaaggcattaagctgcccagcagcagtggatgaaacctcaatatcaaatgttctagcc
atttctgggtttagtattcccaagttggtattgcaaattttgactgttgatgaaattttt
agggttacaagtccggccattaatgaacttgtccttctcaaggagactgcatttactgta
tacaacaaggctcgacggatttcccgagggtcttctggtgatgtagtgcactcatcttca
ctgtctagcagatctcattcagtcatgaatcaaatggcatctattcctgggatgtggaag
gactgtgttggttctcgaatgaccggaccttcccttagtagagagggtgaaattgatgct
agcttgaggcctggcacttgggataattcctggcaagcaacaagatctggaggattaaat
tgtgatccaaacagaaatggagattttcttattcaagacgaaattcgtttcatgtttgaa
ccactctttgtccttgctgaacctggctctttagatcatggtgtttcatctacatttaat
ggcaactcgacttctgatgatagtactggaggcttcatgatgagtggaagtacagcagga
agtgcagatactggatcaagctctcaactggatagatctgagcaggatggctttggatct
ggtcatcacaagagtgttccaagtctgcattgctgctatggatggacagaggattggcgt
tggctggtgtgcatctggactgatgcaaggggagaattgctcgacagccatatatttcct
tttggtggaatcagtagtcgacaggacacaaagggtttgcaatgccttttcgtgcaaatt
ttgcagcagggctgccagatacttcagacatgttgttctcctgattctggtgttgccaag
cctagggatttcgtgattacacgcattggaagtttctatgagcttgaatacttggagtgg
cagaaagccatttattcagttggcgggtccgagatgaagcagtggccgctacaactgcgt
cgatctgtacctgatgggatgccatcaagtactaatggtgcatccttgcagcagcagcag
gagataagtttgattcaagagagagcactaccgtcctcacctagtccattgtacagccct
cactcaaaagcttctggttttatgaaaggtggtctaggacagcctgttggaagaaagcag
cttattggtggacatacgatggttgacaattctaggggattgcttcagtgggtacagagc
atcagctttgtagcaatttcaattgatcattctctgcatctagtccatcaagcagattca
ccatcttctggaggaacccagggtggcaatggtgttggtccgtcaggctatttggaagga
ttcacccctgtaaagtctcttggtgctacacctgcatcttatattttgatcccgtcacca
agcatgcgcttccttcctccagcacctcttcagctccctacttgccttactgctgaatct
ccaccccttgctcatctccttcatagcaagggctctgcaatccccctctccactggattt
gtggtttcaaaatctgttccatctatgagaaaagaccacaaaaacaagttgaaagatgaa
tggccttctgtactttctgtaaatttaattgattattatggaggtaataatattagccaa
gataaagtcactagagtaattatcaagcagggaggaaggaccgcaagctcagaacctaaa
gactttgaagttgaaacccatttgattctcgagtctattgcatcagaacttcatgccctg
tcatggatgacagcaagccctgcgtacttgaatcgtcggactgcgcttccttttcactgt
gatatggtattaagactgagaaggttgcttcattttgctgacagagagctctctcagcag
gcagataatccacaatcctaa

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