Citrus sinensis (Valencia orange): 102621102
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Entry
102621102 CDS
T02983
Name
(RefSeq) pumilio homolog 6, chloroplastic
KO
K17943
pumilio RNA-binding family
Organism
cit
Citrus sinensis (Valencia orange)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
102621102
NCBI-ProteinID:
XP_024953055
LinkDB
All DBs
Position
9:join(32019558..32020175,32020559..32021934,32022016..32022157,32022256..32022363,32023251..32023463,32023554..32023664,32023834..32024022,32025035..32025206,32025823..32025845)
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AA seq
983 aa
AA seq
DB search
MATESPIRMSETSGKWPALKKAAAFAHSSASMAAEELGLLQKGCDVHGSVQRAVPNRSGS
APPNMEGSFLAIENLIARKSSSSGVNLANFNGNIRNSESEERLQANQTCLKYYGSNVNLN
PRLPRHLDHDLNRFGNRRGLTSLDNSSNCSVHVSQVTLSTHKEESEDDRSPKHFSDEMVD
RKNGFCSGNEAVKVAGQNRNLVDIKQEDFPRSSSPVYNQSHSFGYSDSSSLRDPSVISSN
GVSTTTGAHNTGVSSKVDVSTAYNVSSSSHDWTATISSTPPTEEVTSNDTDIWTKDEVLD
RDISHSDISVIISNMKDFNTGHSNLGNQKNQAQLNVHSQVSSSSQVENAHSQVSSLGLIG
THIGMDQFHHGPSRPSTAVQPVVQSSGFTPPLYASAAAYMASPNPFYSNVQAPGFYSPQY
GVGGYVMNSSIGPPLVAGYPPHGGIAMVLDGSAGPSFHPQPSGVSTGGSVVHGSDMQYLN
KIYGQFGFSLQPSFANPLHLQYYQQPFGEAYNISGQFEPLGSKGGVLGSHTNSHELKKGS
DMAASDVQTFQHYRSGETENPSTSKVTVSPYHMGNPPNMGMFVYPSSPLASPALPGSPVV
GTGLLGGRNEMRFSPVSNRYSGWQGQRGFESYNDPKICNFLEELKSGKGRRFELSDITGH
IVEFSADQHGSRFIQQKLENCSVDEKASVFKEILPHASKLMTDVFGNYVIQKFFEYGSPA
QRKELANQLVGQILPLSMQMYGCRVIQKALETIEIEQKAQLVRELDGQVMRCVRDQNGNH
VIQKCIECIPPEKIGFIISAFCGQVAALSMHPYGCRVIQRVLEHCADKHQCQFIVDEILD
NVCALAQDQYGNYVTQHVLQRGKPLERSKIIRKLSGHIVQLSQHKFASNVIEKCLAYGGP
AERELIIEEILGHNEETLLTMMKDQFANYVVQKIFELSSESQQAMMLSRIRTHAHVLKKY
TYGKHIVARFEMLIGEENQTSES
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggctactgagagtccaattagaatgtcggaaacaagtgggaaatggcctgctctgaag
aaagcagcagcatttgcacactcttctgcgagcatggcagcagaagagttagggttgctc
caaaaaggttgtgatgttcatggaagtgtgcaaagggctgtgcctaatagaagtggaagt
gcacccccgaacatggagggttcttttttggctatagagaatcttatagcccgtaagagc
tctagctcgggggtgaatttggctaatttcaatggcaatattcgaaactctgagtctgag
gaacggttacaagctaatcaaacatgtttaaaatattacggttcaaacgtcaacttgaat
cctagacttcctcgacatctagatcacgatctcaataggtttggtaatcgtaggggacta
acttctttagacaatagcagtaactgttcagtgcatgtgtctcaagtcaccctttcgaca
cataaggaagagtctgaggatgatcgctccccaaaacacttttctgatgaaatggtagac
aggaaaaatgggttctgctctggaaatgaggctgttaaagtggcaggccagaacagaaat
ttagttgatataaaacaggaagactttcctcgttcttcatcaccagtgtataatcagtct
cattctttcggctattctgattccagttccttgagagatccctctgttatctcgtcaaat
ggtgtttcaacaactactggtgctcataatacaggggtgtcatcaaaagtggatgtgtca
actgcttataatgtaagctcgtcgtctcatgattggacagcaaccatatcttctactcct
ccaactgaggaagtaacttcaaatgacacagatatttggacaaaagatgaagttttagat
cgggatatcagtcattcagatatttctgttattatttcaaatatgaaggattttaatacg
ggccattcaaatttaggaaatcagaaaaatcaagctcaactcaatgtacattcacaagtc
agcagttcatctcaagttgaaaatgcccattctcaagtaagttccctagggctaattggc
acacacattggcatggatcagtttcatcatggtccttctaggccttcaacagcggtgcag
ccagtagtccagtcatctgggttcacacctccactatatgcaagtgcagctgcctacatg
gcttctcctaatccattttactctaatgttcaagccccaggcttctattctccccaatat
ggtgtaggtggatatgtaatgaattcatcaattggtcctcctttagttgccggatatcct
ccccatggtggtattgcaatggttcttgatggcagtgctggtccaagctttcatcctcag
ccatctggggtttcaactggaggaagcgttgttcatggttctgatatgcagtatcttaac
aagatttatggacagtttgggttttcactgcagccttcttttgcgaatcctctgcatttg
caatactatcagcaaccttttggggaggcgtataatatttctggtcaatttgagccattg
ggttctaaaggtggtgttttggggagccatactaattcccatgaattgaaaaaggggtct
gacatggctgcttctgatgttcagacattccaacattatagaagtggagaaacagaaaat
ccaagcaccagtaaagtgactgtgagtccttatcatatggggaacccaccaaacatgggt
atgtttgtgtacccctcctcaccacttgctagtccagctttgcctgggtctcccgtagtg
gggacaggccttcttggagggagaaatgaaatgaggttttcacctgtttctaatagatat
tctggttggcaaggtcaaagaggttttgagagttataatgatcccaaaatatgtaatttt
cttgaagagttgaaatctggcaaaggtcgaagatttgagctgtctgatatcactggacat
attgttgaatttagtgctgatcaacatgggagtcgatttattcagcagaagttggagaat
tgtagtgttgatgagaaggcatctgtttttaaagaaattcttccacatgcatccaaattg
atgactgatgtgtttggtaattatgttattcaaaagttttttgagtatggaagccctgca
cagcggaaggagctggcaaatcagcttgttggtcagattttgcctttaagtatgcagatg
tatggctgtcgtgtaatccaaaaggcacttgagaccattgagattgaacagaaagcacaa
cttgtccgtgaactggacggacaggttatgagatgtgtgcgtgaccaaaatggaaatcat
gttatacaaaaatgcatcgagtgcattccaccagagaaaattggttttataatttctgct
ttctgtggccaagttgcagcactttcaatgcatccgtatggttgccgtgttatacagaga
gttttagagcattgtgcagataagcatcaatgccagtttatagtggatgagattttggat
aacgtttgtgctcttgctcaggatcagtatggcaattatgttacccagcatgtactgcag
aggggaaaacctcttgaaagaagcaaaattattaggaagttgtcagggcatattgtacaa
ctgagccagcataaatttgcatcaaatgttattgagaaatgcttggcatatggtggtcct
gctgaacgagaacttatcattgaggaaattcttgggcataatgaggaaaccttattgaca
atgatgaaggaccagtttgcaaattatgttgtccagaagatttttgaattaagttctgag
agtcagcaggccatgatgcttagtcgtatcagaacacatgctcatgttttaaagaaatac
acttatgggaagcacattgttgctcgatttgaaatgctaattggagaagaaaatcagaca
tctgaatcttga
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