Citrus sinensis (Valencia orange): 102621232
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Entry
102621232 CDS
T02983
Name
(RefSeq) eukaryotic initiation factor 4A-8
KO
K03257
translation initiation factor 4A
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102621232
03012 Translation factors [BR:
cit03012
]
102621232
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cit04147
]
102621232
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102621232
mRNA cycle factors
Stress granule specific factors
102621232
Translation factors [BR:
cit03012
]
Eukaryotic type
Initiation factors
eIF-4
102621232
Exosome [BR:
cit04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102621232
Exosomal proteins of bladder cancer cells
102621232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DUF2780
Motif
Other DBs
NCBI-GeneID:
102621232
NCBI-ProteinID:
XP_052300355
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All DBs
Position
7:complement(join(7014241..7014876,7014988..7015418,7015659..7015765,7015883..7015950))
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AA seq
413 aa
AA seq
DB search
MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctggtttggcacccgaaggatctcaatttgatgctcgtcagtatgacaccaagatg
aatgaactgctctctactgatgggcaagatttcttcacttcttatgatgaagtttatgac
agttttgatgcaatgggactgcaggaaaaccttttgaggggaatctatgcctatgggttt
gagaagccctctgctattcagcaaaggggaattgttcccttctgcaagggacttgacgtc
attcagcaggctcagtctggaactgggaaaacagcaactttctgctctggaattttgcag
caacttgattatggtcttgtccaatgtcaggccctggtattggcacccactagggaacta
gctcaacagattgagaaagtaatgagggcacttggtgattatcttggtgttaaggttcat
gcttgtgtcggtgggacaagtgttcgcgaggatcagcgcattcttcaagctggtgttcat
gttgttgttggcactcctggtcgtgtgtttgacatgctgcgccgacagtctttacgccct
gattacattaagatgtttgtactggatgaggctgatgaaatgctttcccgtggttttaag
gatcagatctatgatattttccagctgcttccagctaaagttcaggtgggggttttctct
gctacaatgcctcctgaggccttggagattacaaggaagtttatgaacaagcctgtgaga
atcttggttaaacgtgatgaactcacccttgagggtatcaagcaattttatgtcaatgtt
gagaaggaagaatggaagcttgaaacactctgtgatctttatgagactctggccataacc
cagagtgtcatctttgtgaacactcggcgaaaggtcgactggcttacggacaagatgcga
agccgtgaccatacagtctctgccactcatggggacatggatcagaacacccgagatatc
attatgcgtgaatttcgctctggttcttctcgtgttctcatcaccactgatctgttggct
cgtggtattgatgtgcagcaagtttcacttgtcataaattatgatctgccgactcaacca
gaaaactaccttcaccgtattggacgaagtggtcgatttggaagaaagggtgttgccatt
aattttgtgacaagggatgatgagagaatgctttttgatattcaaaagttctataacgtg
gtcattgaggagctgccttcaaacgttgctgaccttctttga
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