Citrus sinensis (Valencia orange): 102621252
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Entry
102621252 CDS
T02983
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03013
Nucleocytoplasmic transport
cit03015
mRNA surveillance pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102621252
09122 Translation
03013 Nucleocytoplasmic transport
102621252
03015 mRNA surveillance pathway
102621252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102621252
03041 Spliceosome [BR:
cit03041
]
102621252
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
102621252
Spliceosome [BR:
cit03041
]
Common components
Common spliceosomal components
Cap binding complex
102621252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
102621252
NCBI-ProteinID:
XP_006469933
LinkDB
All DBs
Position
2:complement(join(11750963..11751037,11751475..11751581,11751683..11751736,11752066..11752176,11752383..11752416,11752517..11752655,11752870..11753093,11753219..11753236))
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AA seq
253 aa
AA seq
DB search
MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI
KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDYGTGSLNSFQPVMQPRYGRHG
GGHGHGGSHRHGRDYQRKRHREDDRHAHETSKRSADFESRRNSDHDSRPEKNPRFRESGD
SDDDEDDDRKQRS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctattcaaggatcaaaggaagctttcagcttatcgtgacagaaggtttccg
gggactcaagaagaattcgaggaagcgttgctagcttcaactactgtttacgtcgggaac
atgtcgttttacacgacggaagagcaaatttatgagcttttttcacgagctggggaaatt
aagaaaatcatcatgggtttggacaagaactccaaaacgccctgtggcttctgttttgcc
ttattctactctagagaagataccgaagatgctgtcaaatatataagtgggacgattctt
gatgatcgtcctattagagttgattttgattggggttttcaggatggaaggcaatggggt
cgtggtcgaagtggtgggcaggtgcgggatgaataccgaacagattatgatcctggcaga
ggtggttatggaaaattagttcagagagagttagaagcacaaagacagcttgtagattat
ggtactggttcattgaactctttccagccggttatgcaacctcgttatggtagacatggt
ggaggccacggacatgggggctctcatcggcatggcagagattatcaacggaagcgacat
cgggaagatgatcgtcatgcacatgagacgtcaaagagaagtgcagattttgaatctagg
agaaattctgatcatgactcaagaccggagaagaatccacgtttccgtgaaagtggtgac
tctgatgatgatgaggatgatgatagaaagcaaagatcttag
DBGET
integrated database retrieval system
