Citrus sinensis (Valencia orange): 102621263
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Entry
102621263 CDS
T02983
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102621263
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102621263
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Beta_helix_3
Motif
Other DBs
NCBI-GeneID:
102621263
NCBI-ProteinID:
XP_024949129
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All DBs
Position
3:complement(join(33247316..33247537,33247633..33247858,33248082..33248371,33248698..33249129))
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AA seq
389 aa
AA seq
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MAKLAVSCTLFIFFINTLFQSASAAYNVINFGAKPDGKSDATQAFLRAWSSACYSNSPAT
LHVPRGLFLVKSISFNGPCRHRIVFQIDGTIIAPSSYWSLGNSGFWILFYKVNRLSIHGG
TIDATGAGYWACRKSGKSCPPPTRSISFVGASNIVVSGLTSINSRFFHIAIDECVNIMLR
KLKINAPSWSPNTDGIHIQSSSGITISNSAIMTGDDCISVGPGTKNLWIERIACGPGHGI
SIGSLGAYAAEDGVKNVTVTDSIFTGTQNGVRIKTWARPSNGFARNIRFRNIIMTKVFNP
IIIDQNYCPDNHCPHQTSGVTISGVTYRNIKGTSATPVAVNFGCSSSKPCTGIKLQVIRL
TYFNKAATAYCKNARGSSSGVVVPGSCLG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggccaagctagcagtttcatgcacactcttcatcttcttcattaataccctcttccaa
tcagcaagtgcagcctataatgtgatcaattttggtgcaaaaccagacggaaaatctgac
gccacacaggcgttccttcgggcgtggtcatcggcatgctactccaatagtccggccacg
ctgcatgttcctcggggacttttcttggtaaaatcgatatcctttaatggaccatgtagg
cacaggattgtgtttcagattgatggaacaattatcgctccatcaagttattggtctcta
ggcaattcgggattttggattttgttttacaaggtcaatagattgagtatacatggagga
accattgatgcaacaggagctggctattgggcttgcaggaaatctggaaaaagttgccct
cctccaacaaggtcaatatcatttgtgggggctagtaatattgttgtcagcggattaaca
tccatcaacagcagattttttcatatagctattgacgaatgcgttaatattatgcttcga
aagttgaaaattaatgccccaagctggagtccaaacactgatggcatccacatccaatca
tcctcaggcattacaattagcaacagtgccattatgactggagatgattgcatctcagtc
ggtcctggcactaaaaacttatggattgaacgcattgcctgtggccctggccacggaatc
agcattggcagccttggggcctatgctgctgaagatggtgtaaaaaatgtgacagtaaca
gattcaattttcactggaactcaaaatggtgtacggatcaaaacatgggcgagacccagc
aatggatttgcaagaaacattagatttcgaaatattattatgacaaaggtctttaatcct
atcatcatcgatcaaaattattgccctgacaatcattgtcctcatcagacctctggcgtg
acaatcagtggagtgacatacagaaatataaaaggaacatcagcaacaccagtggcagta
aattttggttgcagttcaagcaagccgtgcacaggaatcaaattacaggtcataaggctt
acttatttcaataaagcagcgactgcatattgtaagaatgcaaggggtagcagcagtgga
gtggtggtaccggggagttgtttgggatag
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