Citrus sinensis (Valencia orange): 102621355
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Entry
102621355 CDS
T02983
Name
(RefSeq) E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102621355
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102621355
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102621355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-Nse
Prok-RING_4
zf-rbx1
zf-ANAPC11
zf-RING_10
Zn_ribbon_6
RING_XB3-XBAT31
Sina_RING
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
102621355
NCBI-ProteinID:
XP_006493068
LinkDB
All DBs
Position
9:join(17555130..17555360,17555473..17555566,17556158..17556264,17557655..17557885)
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AA seq
220 aa
AA seq
DB search
MSTWELGQCLGRNARDSQRRRILPELDLNYPPTDGNIATNSQEYPFDGHSDSRGDIGDCV
EVIDDDLAIINQRIFAEAKNNSRRNHSQVVDQLRHVLTDAGGLLDSLQEVTDLAILYVKQ
RRNRPDEATPDNCCINVDTSNNNKNDAAPLQLPQDPMAAAPTFSCPICMGPLSEATSTKC
GHIFCKDCIKGAIAAQGKCPNCRQKVGKRGIFRVYLPTLS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttgggaactcggacaatgtttaggaaggaatgcgagagacagtcagagaaga
aggattctaccagaattggacctcaactatccacctacagatggaaacattgctactaat
tctcaagaatatccatttgatgggcacagtgattctcgaggagatataggagattgcgta
gaggttattgatgatgatctagctataattaaccaaaggatatttgctgaagccaagaac
aattctcgaagaaaccattctcaggttgttgatcagttgagacatgtgcttactgatgcc
ggaggattattagacagccttcaagaagtcacagacctggcaattttgtatgtcaagcag
agaaggaacagaccagatgaagcaactcctgataattgttgcataaatgtggacactagt
aacaataacaagaatgatgccgcgcctctacagttgccccaggatcctatggctgcagct
cctacattcagttgcccaatctgcatgggtccactgagtgaagcaacatcaacaaagtgt
ggtcacatattctgtaaggactgcatcaagggcgcaattgcagcacaaggaaaatgccct
aactgccggcagaaagtaggaaagcgaggcattttcagggtctatcttccgactctcagt
tga
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integrated database retrieval system
