Citrus sinensis (Valencia orange): 102621447
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Entry
102621447 CDS
T02983
Name
(RefSeq) flap endonuclease GEN-like 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cit03400
]
102621447
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102621447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
102621447
NCBI-ProteinID:
XP_006490998
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All DBs
Position
3:complement(join(50659393..50659656,50660311..50660783,50660914..50660934,50661151..50661286,50661470..50661716,50661840..50662021,50662762..50662932,50663651..50663824,50664218..50664415))
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AA seq
621 aa
AA seq
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MGVGGKFWDLLKPYARFEGLDFLRDKRVAVDLSYWIVQHETAIKKNSVPKPHLRLTFFRT
INLFAKFGAFPVFVVDGTPSPLKSQARLARFYRSTIDASTLPVAEEGILVERNQTFLKCV
QECVELLELFGMPVLKAKGEAEALCAQLNSEGSVDACITADSDAFLFGAKCVVKCIRPNT
KEPFECYCISDIEAGLGLKRKHLIAMSLLIGNDHDLNGVQGIGLDTALQFVQNFSEDEIL
NILHKIGNGDILQYWGDIKSTEEAVSHSDESMPMIKSSHCSFCGHPGTKRAHFKVSCEYC
INDNNEGCLKKPDGFKCNCSLCNKNRKEKEQKKHENWWIKVCSKIALETNFPNDEIVTMY
LCENNGTFTVMGGGIIATDGPSISWGSPMTEMLVDFLVYHQPWQPSYIRQKMLPMLSTIY
LREMATNPVQTLLCGQYEFDSIHRVKIRYGHQSYVVKWKKAASAISGVKYTAPVDSDLHL
EEFMEVDEPNDLLDESSSPQIHVDGDCWFLLMDENMKLVHSAFPKKVDHFLQENERRELK
RKRTSSLRSEESNGKLESPKSKGVQLSITEFYRSAKVQSQEKSGADLAKDSNCQVDRISK
ENRRVSSPNLSKSARRRLLFN
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttggaggcaagttctgggatttattaaaaccctacgcccggttcgaaggtttg
gatttcttgagagacaaacgggtggcagtggatctctcgtactggatcgttcaacacgag
actgcaatcaagaagaacagtgtccctaaaccccatctcaggctcacattctttcgtacc
attaacctattcgccaagtttggtgcgtttccagtctttgttgttgatgggactccttcg
ccattgaaatctcaggcaaggttggcacggttttaccgttctaccattgatgcttcaact
ttgcctgtagctgaagaaggcatccttgtggagaggaaccagacatttttaaaatgtgtt
caagaatgtgtggaactgcttgaactatttgggatgcctgttctaaaagcaaaaggagag
gctgaagcactgtgtgcacaattaaatagtgaaggttctgtagatgcgtgcattacagct
gatagtgatgcattcctttttggagctaaatgcgtagtaaaatgcatcaggcccaataca
aaggaaccatttgaatgctactgtatatcagatattgaagctggtcttgggctgaagagg
aagcacttgatagccatgtctcttctgataggaaatgaccatgatttaaatggggtacaa
ggaatcgggctagatacagctcttcaatttgtccaaaatttttctgaagatgagatatta
aatattttacacaaaataggcaatggtgatattctgcaatattggggtgatattaaatcg
acagaggaagctgtatcccattcagatgaaagcatgccaatgataaaatcttctcattgt
tccttctgtgggcatccaggcaccaagagagctcattttaaggtttcttgtgaatactgc
attaatgataataacgagggctgcttgaaaaaaccagatggatttaaatgtaattgctcc
ctctgcaataagaatcgaaaagaaaaggaacaaaagaaacatgaaaattggtggattaaa
gtttgcagcaagattgccttggaaacaaatttcccaaatgatgaaattgttacaatgtac
ttgtgcgagaataatggtacctttacagttatgggtggagggatcattgcaactgatggc
ccttctatatcatggggtagcccaatgactgaaatgctagttgatttcttggtttaccat
cagccctggcagccgtcatatattcggcaaaagatgcttccaatgctgtccactatatat
ttgagagaaatggccacaaatccagtacagactttgttgtgtggacaatatgaatttgat
tctattcatcgtgtgaagataagatatggacatcaatcctatgtggtcaagtggaagaag
gctgcttctgcgatcagtggtgttaagtatacagcccctgttgactctgatttgcatctg
gaagaattcatggaagttgatgaacccaatgatctgctcgatgaatccagtagcccccag
attcatgttgatggagattgctggtttttgctgatggatgaaaatatgaagcttgtgcat
tctgcttttccaaaaaaagtagaccactttttgcaagaaaatgagcgaagagagttgaaa
agaaaaaggacttcaagtttgagatctgaagagtccaatgggaagttagaatcaccaaaa
tcaaagggggttcagcttagtattactgaattttatcgttcagccaaagtacaatcccag
gaaaaatcaggtgcagatttggccaaggattccaattgtcaggttgataggatatcaaag
gagaacaggagagtgtcaagtccgaatctttccaagtctgcgaggcgtcgtcttttgttt
aactaa
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