Citrus sinensis (Valencia orange): 102621490
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Entry
102621490 CDS
T02983
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102621490
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102621490
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
102621490
NCBI-ProteinID:
XP_006478561
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All DBs
Position
3:complement(join(33602587..33602811,33602913..33603141,33603238..33603527,33603654..33604103))
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AA seq
397 aa
AA seq
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MSTSRSLPISFLTFLLILFFSSSLAIPLSYNVLSFGARPDGRTDSAKSFLAAWAKACGSA
EAATIYVPRGRYLLHNAVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVNGV
SINGGVLDGQGAGLWACKKSDNSNCPSGATTLRFSNSNNVVINGLASVDSQKFHIVINGC
NHVKVQGVKVSASGDSPNTDGIHVQSSSGVTILDSKIGTGDDCVSVGPGTTNLWIENVAC
GPGHGISIGSLGKEQQEAGVQNVTVTAVTFTGTKNGVRIKSWGRPSNGFARNILFQHALM
NNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGI
SLEDVKLIYKNQPAEASCANADGSASGFILPNSCLKT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcaaggtctttgcctattagttttttaacatttcttttgattctcttcttt
agttcatctttagcaattcccttgagttacaatgtgctgagcttcggagccagacccgat
ggtcggactgactcagcaaaatcctttcttgctgcgtgggctaaagcctgtggctcggcg
gaggccgcaaccatttacgtgccacgggggaggtacttactacacaatgctgtgtttcag
ggccaatgcaagaacaatgatattaccatacgtattgacgggactctggtggctccagct
gattatcatgttattggaaatgccgaaaactggattttatttgagcatgttaatggggtt
tctattaatggcggcgttcttgatggccaaggtgctggcttgtgggcttgtaaaaagtca
gacaatagtaattgccccagtggcgctacgacacttcgctttagcaactcaaacaacgtt
gtgattaacggattagcatccgtagatagccagaaatttcatattgtcatcaacggatgc
aaccatgtgaaagtacaaggggtcaaagtttcggcctccggtgacagccccaacaccgat
ggcattcacgttcaatcatcaagtggtgtcacaattttggactcaaaaattgggactggt
gatgattgtgtatcagttggcccaggcaccaccaatttatggattgagaatgtcgcttgt
ggccctggccatggtattagcattggcagcttaggcaaagagcaacaagaggctggagtg
caaaatgtgacagtaacagctgtgacatttacaggcactaaaaatggagtgaggattaag
tcctgggggagaccaagcaatggatttgccaggaacattcttttccaacacgctcttatg
aacaatgtcgataatccaatcataattgatcaaaattactgccctgacaacaacaattgc
cctggacaggcttcaggggttaaaatcagtgatgtgatatatcaagacattcatggaact
tcggcaacggaagttggagtaaagctcgattgcagttcgaagaatccatgcactggaatt
agcttggaggatgtgaagctcatttacaagaatcaaccagctgaagcttcctgcgccaac
gctgatggatcggcctctggatttattctgccaaatagttgcttgaagacttga
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