Citrus sinensis (Valencia orange): 102621573
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Entry
102621573 CDS
T02983
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-42
KO
K08489
syntaxin 16
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
102621573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102621573
Membrane trafficking [BR:
cit04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
102621573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_N
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
102621573
NCBI-ProteinID:
XP_015386195
LinkDB
All DBs
Position
3:join(45663150..45663337,45663980..45664230,45664711..45664800,45665034..45665111,45665503..45665592)
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AA seq
232 aa
AA seq
DB search
MATGNRTGVYRKKRDSLKSARAPLSSSASGSAGPVIEMVSGSLLRSNRSSYAPLSTEDPG
PSSSDAFSVGLPPAWVDDAEEIAVNTQRARVKMAELVXSFGDGKQDQHMIEILTYEITDL
LRGSEKRLDKLSAAGSSEDSNLRKNVQHSLATDLQNHSMDLRKNHSTYLKHLQQQKEGCD
GVDLEMNFNEDKYRLEDDGFSDGGFDAHQMMKLNNCRKSSSFPEIINPLTKA
NT seq
697 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggaaaccggacgggtgtttacagaaagaaaagagattcattgaagagcgcg
cgtgctcctctgtcttcatcggcttccggttcggcaggtccggttattgaaatggtgagc
ggttcgttgcttcgctctaatcgctcttcttatgctcctctcagtactgaagatcccggt
ccttctagcagtgatgcattttcggtaggtctaccaccagcatgggtggatgacgctgaa
gaaatagcagttaatacacaacgtgctcgggtcaaaatggcagaacttgtcatcttttgg
agatggcaaacaagatcaacacatgatcgagattcttacatatgagattacagatctttt
aaggggatctgagaagagattagataaactttctgctgctggctcttcagaagattcaaa
tcttagaaaaaatgtacagcattctcttgcaacagaccttcagaaccattcaatggacct
caggaaaaaccattcaacgtatttgaagcatttgcagcagcaaaaggagggatgtgatgg
tgttgacttggagatgaactttaacgaggacaaatatagattggaagatgatggatttag
tgatgggggttttgatgcgcatcagatgatgaagttaaacaactgtagaaagtcttcttc
tttccccgagattataaacccactcacaaaagcatga
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