Citrus sinensis (Valencia orange): 102621636
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Entry
102621636 CDS
T02983
Name
(RefSeq) PHD finger protein MALE STERILITY 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102621636
Transcription factors [BR:
cit03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102621636
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GFIT
Motif
Pfam:
PHD
PHD_5
PHD_2
PHB_acc
Gin
Motif
Other DBs
NCBI-GeneID:
102621636
NCBI-ProteinID:
XP_006492305
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Position
2:complement(join(23278936..23280322,23280408..23280684,23280840..23280963))
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AA seq
595 aa
AA seq
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MPCWSFQLEVRGHPPFHVFLFVIEEPVEASMDHQCKHCRYVGWGHHMVCIKKYHFILPSK
NMAAAYLNFQGNEGEDAGMLSNLMQLQGHAMHGVFHSNGFGHLLCVNGVETGSDLTGHQI
MDFWDRLCSGLQARKVSLYDISRKKGMELRLLHVVAYSQSWFGHWGYKFGRGSFGVTQPM
YQKAIEAMRGMPLCLLLNHLGHLNPDIPLIFTRYQTLSDHFLATLGDLFHFLLDLKSRLP
KENCNFGSYNPGILVETNCRWSAKRVEMATRVIVESLKRAESRWVSRQEVRDVARSYVGD
TGLLDFVLKSLGNHIVGKYLVRRSLNPVTKVLEYCLEDISNVFPEQDLVLGNSKTKTRYK
ISVAQLMKDVRILYKLILHDQKPATSSGIFSGISVASRIILDTKYFVKECCRDQVSSTKP
GLDLEGKLKLYCTVILRDSENPNGGRNNSAMQPYECVTIKNNATFDELKLEVQRNFRELY
WGLRSFVIESIVNVNATGTDLVCGFVEVGRRIVFEGSNSERGIVYGQIYENGMVNCVVEC
ACGADEDDGERMVSCDICEVWQHTRCARIPNNEEIPHIFLCNRCEQEIVHLSSLP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgccatgttggtcatttcaacttgaagtccgtggccatcctccattccatgtcttttta
tttgtcatcgaggaaccagttgaggcgtcaatggatcatcaatgcaagcactgccgctac
gttggctggggacaccatatggtttgtattaagaagtatcattttattttgccctcaaag
aacatggctgctgcttatttaaacttccaaggcaatgaaggtgaagatgctggtatgttg
tcgaatttaatgcaactacagggccatgccatgcatggtgttttccactcaaacgggttc
gggcatttgctgtgtgtcaatggtgttgaaacgggttcggacttgaccggacaccagatc
atggatttctgggatcgtttgtgtagtggattacaagcaaggaaagtgagtttgtatgac
atttcaaggaagaaaggcatggaattgaggcttcttcatgtagttgcatatagccagtca
tggtttggtcattggggctacaaatttgggcgtggcagctttggtgttactcaacccatg
taccaaaaagcaatagaagcaatgcggggcatgcctctgtgcttgcttcttaatcacctc
ggacatttgaatccagacattccactcattttcacaagatatcagacactatcggaccat
tttttggccacgcttggtgatcttttccatttcttgctggacctcaagtccaggcttccg
aaagaaaattgtaattttggttcttacaatcctggaatcctagtggaaactaactgtaga
tggtctgccaagagagtcgaaatggctactcgagtgatcgttgaatcactgaaaagagct
gaatccaggtgggtttccaggcaagaagttagggatgttgctcgttcttatgttggtgac
acaggattgctagatttcgtgctgaaatctcttggaaaccacatagtggggaaatatttg
gttcgccgcagcttgaatcctgtgacgaaagttcttgagtattgcttggaagatatttcc
aatgtatttcctgaacaggatttggtgctcggcaattcaaagacaaagactcggtacaag
atttcagtggctcaattgatgaaggacgtgcgcattttgtacaagcttattttgcatgat
caaaagccggcaacgagctcaggaattttcagtgggatatcagtggcttccaggataatt
cttgacaccaaatactttgttaaagaatgttgtcgagaccaggtttcttctactaaacct
ggattggacctggaagggaaattaaagctctattgcacggttatattaagagacagtgaa
aatccaaatggaggacgaaacaatagcgcaatgcagccgtacgaatgtgtcacaataaag
aacaatgccacatttgatgagcttaagctagaagtgcaaaggaactttagagaattgtat
tggggattgaggagtttcgtgatcgaatcaatagtgaatgtgaatgccactggcacagat
ttggtttgtgggtttgttgaagtgggtagaagaattgtttttgaaggaagcaacagcgag
agaggaattgtttatggccaaatatatgaaaatgggatggtaaattgtgttgtagaatgt
gcttgcggtgctgacgaggatgatggtgaaagaatggtttcttgcgatatttgtgaagtt
tggcagcacacacggtgtgctcgcattcctaacaatgaggaaattccccatatttttctt
tgcaatcggtgcgagcaagagattgtacatctatcttctttaccatag
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